RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	SNX4	O95219	450 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	APRT	P07741	180 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	HRH2	P25021	359 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	APEX1	P27695	318 aa	Known RBP	4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	GRK3	P35626	688 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	HNF4A	P41235	474 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	GRIA1	P42261	906 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	MSH2	P43246	934 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	ZNF75D	P51815	510 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	DVL1P1	P54792	670 aa	Predicted RBP	4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	RAB8A	P61006	207 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	IL13RA1	P78552	427 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	SRSF4	Q08170	494 aa	Known RBP	4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	FUT7	Q11130	342 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	THOC5	Q13769	683 aa	Known RBP	4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	FGFBP1	Q14512	234 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	CTU2	Q2VPK5	515 aa	Known RBP	4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	TTLL9	Q3SXZ7	439 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	PCID2	Q5JVF3	399 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	UGT3A1	Q6NUS8	523 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	CASC4	Q6P4E1	433 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	NXPE4	Q6UWF7	544 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	CCBE1	Q6UXH8	406 aa	Predicted RBP	4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	SCUBE1	Q8IWY4	988 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	GALNT12	Q8IXK2	581 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	DND1	Q8IYX4	353 aa	Known RBP	4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	FBXL14	Q8N1E6	418 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	CA13	Q8N1Q1	262 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	ZNF619	Q8N2I2	560 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	MUC15	Q8N387	334 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	MPP5	Q8N3R9	675 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	OR14A16	Q8NHC5	309 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	OR14L1P	Q8NHC6	308 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	RDH11	Q8TC12	318 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	SLC2A12	Q8TD20	617 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	PTPMT1	Q8WUK0	201 aa	Predicted RBP	4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	ZNF480	Q8WV37	535 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	FIG4	Q92562	907 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	ALG3	Q92685	438 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	ZBTB8A	Q96BR9	441 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	S100PBP	Q96BU1	408 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	WWC2-AS2	Q96NR7	200 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	PKP4	Q99569	1192 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	SLC6A7	Q99884	636 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	C1QTNF5	Q9BXJ0	243 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	FAM129A	Q9BZQ8	928 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	IL22	Q9GZX6	179 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	RAB6B	Q9NRW1	208 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	CATSPERZ	Q9NTU4	200 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	TEX10	Q9NXF1	929 aa	Predicted RBP	4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	COPS7A	Q9UBW8	275 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	DMGDH	Q9UI17	866 aa	Known RBP	4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	KLHL21	Q9UJP4	597 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	GUCA1B	Q9UMX6	200 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	PACSIN2	Q9UNF0	486 aa	Predicted RBP	4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	GPR52	Q9Y2T5	361 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	CLDN16	Q9Y5I7	305 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	SNX8	Q9Y5X2	465 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	GOLGA6L10	A0A0M3HER8	536 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	LOC390937	A0A1W2PQ73	354 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	CCDC162P	A2VCL2	907 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	MROH6	A6NGR9	719 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	C17orf105	B2RV13	164 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	SHISA9	B4DS77	424 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	MYO1C	O00159	1063 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	TP53I11	O14683	189 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	PRMT5	O14744	637 aa	Predicted RBP	4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	CD3EAP	O15446	510 aa	Known RBP	4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	ZBTB14	O43829	449 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	SLC16A8	O95907	504 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	SYF2	O95926	243 aa	Known RBP	4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	BCL10	O95999	233 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	CCDC175	P0C221	793 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	FBXO45	P0C2W1	286 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	BMP4	P12644	408 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	MGAT1	P26572	445 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	FOXN2	P32314	431 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	LHX2	P50458	406 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	HNRNPF	P52597	415 aa	Known RBP	4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	CDH15	P55291	814 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	CLDN18	P56856	261 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	HSD17B7	P56937	341 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	LOXL3	P58215	753 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	CCZ1B	P86790	482 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	CCZ1	P86791	482 aa	Predicted RBP	4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	TAB1	Q15750	504 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	FAM189A2	Q15884	450 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	CCNG2	Q16589	344 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	NTRK2	Q16620	822 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	BBS9	Q3SYG4	887 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	TSTD2	Q5T7W7	516 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	TIGD3	Q6B0B8	471 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	AAGAB	Q6PD74	315 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	FAM214B	Q7L5A3	538 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	REC114	Q7Z4M0	266 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	GLCCI1	Q86VQ1	547 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	IFNE	Q86WN2	208 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	UBQLNL	Q8IYU4	475 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	SLC15A4	Q8N697	577 aa		4.79	□□□□□ -1.64
SEC13-219	ENST00000492602	MFSD9	Q8NBP5	474 aa		4.79	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 330.4 ms