RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 PKDREJQ9NTG1 2253 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 A0A0A6YYD5 115 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 TRBV11-1A0A0K0K1C0 115 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 C1orf226A1L170 272 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 NPIPB8E9PQR5 432 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 FCHO1O14526 889 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 PIP5K1BO14986 540 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 HDAC3O15379 428 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 PCDH7O60245 1069 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 PRKNO60260 465 aaPredicted RBP10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 NME2P1O60361 137 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 SHOX2O60902 331 aaPredicted RBP10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 PEX11AO75192 247 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 SNNO75324 88 aaPredicted RBP10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 SLC25A12O75746 678 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 TGDSO95455 350 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 ANXA4P09525 319 aaPredicted RBP10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 KITP10721 976 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 PRPS2P11908 318 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 NME2P22392 152 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 CERS1P27544 350 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 PTGER1P34995 402 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 RFC3P40938 356 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 NR0B1P51843 470 aaKnown RBP10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 TBL3Q12788 808 aaKnown RBP10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 MAPKAPK3Q16644 382 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 ZNF630Q2M218 657 aaPredicted RBP10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 SMU1Q2TAY7 513 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 TCHHL1Q5QJ38 904 aaPredicted RBP10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 SLC25A25Q6KCM7 469 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 GALNT18Q6P9A2 607 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 C3P1Q6ZMU1 363 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 C16orf47Q6ZP98 133 aaPredicted RBP10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 Q6ZPB1 254 aaPredicted RBP10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 COMMD6Q7Z4G1 85 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 SCUBE1Q8IWY4 988 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 LRRC34Q8IZ02 419 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 SAMD14Q8IZD0 417 aaPredicted RBP10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 TMEM132CQ8N3T6 1108 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 APCDD1LQ8NCL9 501 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 THAP3Q8WTV1 239 aaPredicted RBP10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 TMEM125Q96AQ2 219 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 APIPQ96GX9 242 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 C7orf26Q96N11 449 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 CSF3RQ99062 836 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 HBEGFQ99075 208 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 PRPF18Q99633 342 aaKnown RBP10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 ZNF395Q9H8N7 513 aaPredicted RBP10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 CHST11Q9NPF2 352 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 MRGBPQ9NV56 204 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 PNPOQ9NVS9 261 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 KCMF1Q9P0J7 381 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 MEMO1Q9Y316 297 aa10.24□□□□□ -0.77
TMEM39A-211ENST00000491685 NCKAP5O14513 1909 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 HCFC1P51610 2035 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 MYOCOSA0A1B0GUC4 107 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 EEDO75530 441 aaKnown RBP10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 SKAP2O75563 359 aaPredicted RBP10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 ETHE1O95571 254 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 GBAP04062 536 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 IFNA16P05015 189 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 ESRRAP11474 423 aaPredicted RBP10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 COX7A2P14406 83 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 LBPP18428 481 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 PIK3R1P27986 724 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 RPL3P39023 403 aaKnown RBP10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 ASMTP46597 345 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 HTR6P50406 440 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 SMSP52788 366 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 C2orf80Q0P641 193 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 RPS6KA2Q15349 733 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 GALNTL6Q49A17 601 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 MRM1Q6IN84 353 aaKnown RBP10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 NOXRED1Q6NXP6 359 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 Q6ZSR9 355 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 SPPL2CQ8IUH8 684 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 FAM47BQ8NA70 645 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 FNDC5Q8NAU1 212 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 OR4K14Q8NGD5 310 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 SORT1Q99523 831 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 MAPKAP1Q9BPZ7 522 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 PELOQ9BRX2 385 aaKnown RBP10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 ALOXE3Q9BYJ1 711 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 TRIM8Q9BZR9 551 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 C20orf27Q9GZN8 174 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 NSRP1Q9H0G5 558 aaKnown RBP10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 TRIM45Q9H8W5 580 aaPredicted RBP10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 LIN28AQ9H9Z2 209 aaKnown RBP10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 GIMAP4Q9NUV9 329 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 ASB4Q9Y574 426 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 ZNF780BQ9Y6R6 833 aa10.23□□□□□ -0.77
TMEM39A-211ENST00000491685 ATP6AP2A0A1C7CYW4 349 aa10.22□□□□□ -0.77
TMEM39A-211ENST00000491685 CYR61O00622 381 aa10.22□□□□□ -0.77
TMEM39A-211ENST00000491685 ADAM10O14672 748 aa10.22□□□□□ -0.77
TMEM39A-211ENST00000491685 ASNA1O43681 348 aa10.22□□□□□ -0.77
TMEM39A-211ENST00000491685 ATP6AP2O75787 350 aa10.22□□□□□ -0.77
TMEM39A-211ENST00000491685 GPR75O95800 540 aa10.22□□□□□ -0.77
TMEM39A-211ENST00000491685 VIMP08670 466 aaKnown RBP10.22□□□□□ -0.77
TMEM39A-211ENST00000491685 ZNF24P17028 368 aa10.22□□□□□ -0.77
TMEM39A-211ENST00000491685 TIA1P31483 386 aaKnown RBP eCLIP10.22□□□□□ -0.772e-7■■■■□ 20.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms