RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 IL1RL2Q9HB29 575 aa13.92□□□□□ -0.18
USP39-217ENST00000491659 GIMAP4Q9NUV9 329 aa13.92□□□□□ -0.18
USP39-217ENST00000491659 MKS1Q9NXB0 559 aa13.92□□□□□ -0.18
USP39-217ENST00000491659 UTS2RQ9UKP6 389 aa13.92□□□□□ -0.18
USP39-217ENST00000491659 CFL2Q9Y281 166 aa13.92□□□□□ -0.18
USP39-217ENST00000491659 DLGAP4Q9Y2H0 992 aa13.92□□□□□ -0.18
USP39-217ENST00000491659 A0A1B0GTH9 108 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 TP53I11O14683 189 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 ZNHIT1O43257 154 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 TPOP07202 933 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 DRD2P14416 443 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 KCNJ2P63252 427 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 RAE1P78406 368 aaKnown RBP13.91□□□□□ -0.18
USP39-217ENST00000491659 HEPACAMQ14CZ8 416 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 RPS6KA2Q15349 733 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 PRICKLE4Q2TBC4 344 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 PRAMEF20Q5VT98 475 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 WDR93Q6P2C0 686 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 SCIMPQ6UWF3 145 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 CD163Q86VB7 1156 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 CHERPQ8IWX8 916 aaKnown RBP13.91□□□□□ -0.18
USP39-217ENST00000491659 SAMD14Q8IZD0 417 aaPredicted RBP13.91□□□□□ -0.18
USP39-217ENST00000491659 FAM109AQ8N4B1 249 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 ZNF615Q8N8J6 731 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 ZNF441Q8N8Z8 693 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 FAM57AQ8TBR7 257 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 TP53INP1Q96A56 240 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 DEFB127Q9H1M4 99 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 C12orf65Q9H3J6 166 aaKnown RBP13.91□□□□□ -0.18
USP39-217ENST00000491659 ZDHHC11Q9H8X9 412 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 SH2D2AQ9NP31 389 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 PLSCR2Q9NRY7 297 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 TUBA8Q9NY65 449 aaPredicted RBP13.91□□□□□ -0.18
USP39-217ENST00000491659 MAT2BQ9NZL9 334 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 CNIH4Q9P003 139 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 HEY2Q9UBP5 337 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 BCAP29Q9UHQ4 241 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 LGALS13Q9UHV8 139 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 BOKQ9UMX3 212 aaPredicted RBP13.91□□□□□ -0.18
USP39-217ENST00000491659 ENTPD4Q9Y227 616 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 MEMO1Q9Y316 297 aa13.91□□□□□ -0.18
USP39-217ENST00000491659 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.91□□□□□ -0.18
USP39-217ENST00000491659 NCOA6Q14686 2063 aaPredicted RBP13.91□□□□□ -0.18
USP39-217ENST00000491659 PRSS44E7EML9 344 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 PDE9AO76083 593 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 GLSO94925 669 aaPredicted RBP13.9□□□□□ -0.18
USP39-217ENST00000491659 ANXA4P09525 319 aaPredicted RBP13.9□□□□□ -0.18
USP39-217ENST00000491659 UROSP10746 265 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 GPX3P22352 226 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 PIGAP37287 484 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 DCTP40126 519 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 MAGEA5P43359 124 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 RPP38P78345 283 aaKnown RBP13.9□□□□□ -0.18
USP39-217ENST00000491659 ZNF763Q0D2J5 394 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 MAP4K2Q12851 820 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 ART3Q13508 389 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 PCLAFQ15004 111 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 NTRK2Q16620 822 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 GALNT18Q6P9A2 607 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 FAM111BQ6SJ93 734 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 FGD2Q7Z6J4 655 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 TRABD2AQ86V40 505 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 C10orf107Q8IVU9 208 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 SRRM1Q8IYB3 904 aaKnown RBP13.9□□□□□ -0.18
USP39-217ENST00000491659 TMEM251Q8N6I4 163 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 C17orf47Q8NEP4 570 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 OR10G3Q8NGC4 313 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 OR5M3Q8NGP4 307 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 CDC26Q8NHZ8 85 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 C16orf78Q8WTQ4 265 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 PHF10Q8WUB8 498 aaKnown RBP13.9□□□□□ -0.18
USP39-217ENST00000491659 CAVIN3Q969G5 261 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 EXOSC8Q96B26 276 aaKnown RBP13.9□□□□□ -0.18
USP39-217ENST00000491659 CNRIP1Q96F85 164 aaPredicted RBP13.9□□□□□ -0.18
USP39-217ENST00000491659 SHCBP1LQ9BZQ2 653 aa13.9□□□□□ -0.18
USP39-217ENST00000491659 ROPN1BQ9BZX4 212 aaPredicted RBP13.9□□□□□ -0.18
USP39-217ENST00000491659 ROPN1Q9HAT0 212 aaPredicted RBP13.9□□□□□ -0.18
USP39-217ENST00000491659 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.9□□□□□ -0.18
USP39-217ENST00000491659 V9GYY5 206 aaPredicted RBP13.9□□□□□ -0.18
USP39-217ENST00000491659 E9PLN8 166 aa13.89□□□□□ -0.19
USP39-217ENST00000491659 TRIM13O60858 407 aa13.89□□□□□ -0.19
USP39-217ENST00000491659 RSL1D1O76021 490 aaKnown RBP13.89□□□□□ -0.19
USP39-217ENST00000491659 ADORA2A-AS1P86434 159 aa13.89□□□□□ -0.19
USP39-217ENST00000491659 DUSP2Q05923 314 aa13.89□□□□□ -0.19
USP39-217ENST00000491659 EXOSC7Q15024 291 aaKnown RBP13.89□□□□□ -0.19
USP39-217ENST00000491659 HYAL4Q2M3T9 481 aa13.89□□□□□ -0.19
USP39-217ENST00000491659 TBCELQ5QJ74 424 aa13.89□□□□□ -0.19
USP39-217ENST00000491659 ZNF787Q6DD87 383 aa13.89□□□□□ -0.19
USP39-217ENST00000491659 FAM180BQ6P0A1 224 aa13.89□□□□□ -0.19
USP39-217ENST00000491659 XKRXQ6PP77 449 aa13.89□□□□□ -0.19
USP39-217ENST00000491659 DOLPP1Q86YN1 238 aa13.89□□□□□ -0.19
USP39-217ENST00000491659 BANPQ8N9N5 519 aa13.89□□□□□ -0.19
USP39-217ENST00000491659 ADCY4Q8NFM4 1077 aa13.89□□□□□ -0.19
USP39-217ENST00000491659 DIO2Q92813 273 aa13.89□□□□□ -0.19
USP39-217ENST00000491659 ADIPOR1Q96A54 375 aa13.89□□□□□ -0.19
USP39-217ENST00000491659 ZNF681Q96N22 645 aa13.89□□□□□ -0.19
USP39-217ENST00000491659 PHF12Q96QT6 1004 aa13.89□□□□□ -0.19
USP39-217ENST00000491659 VKORC1Q9BQB6 163 aa13.89□□□□□ -0.19
USP39-217ENST00000491659 TRMOQ9BU70 441 aa13.89□□□□□ -0.19
USP39-217ENST00000491659 TP63Q9H3D4 680 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms