RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 MILR1Q7Z6M3 343 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 YRDCQ86U90 279 aaKnown RBP8.16□□□□□ -1.1
HDAC3-211ENST00000491581 GPALPP1Q8IXQ4 340 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 DMRTC2Q8IXT2 367 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-211ENST00000491581 ZZZ3Q8IYH5 903 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 LRRC25Q8N386 305 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-211ENST00000491581 FBXW8Q8N3Y1 598 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 MMGT1Q8N4V1 131 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 C1orf52Q8N6N3 182 aaKnown RBP8.16□□□□□ -1.1
HDAC3-211ENST00000491581 CDYL2Q8N8U2 506 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 RDH11Q8TC12 318 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 SLC22A8Q8TCC7 542 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 ZNF483Q8TF39 744 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-211ENST00000491581 ANP32BQ92688 251 aaKnown RBP8.16□□□□□ -1.1
HDAC3-211ENST00000491581 ISL2Q96A47 359 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 TM4SF18Q96CE8 201 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 CNRIP1Q96F85 164 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-211ENST00000491581 RILPQ96NA2 401 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 TMEM237Q96Q45 408 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 FRG2BQ96QU4 278 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 SPOCK3Q9BQ16 436 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 DOHHQ9BU89 302 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 EBPLQ9BY08 206 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 OR10A5Q9H207 317 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 TNFRSF12AQ9NP84 129 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 ZFP64Q9NPA5 681 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 LYARQ9NX58 379 aaKnown RBP8.16□□□□□ -1.1
HDAC3-211ENST00000491581 MAT2BQ9NZL9 334 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 NFU1Q9UMS0 254 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 TIMM22Q9Y584 194 aa8.16□□□□□ -1.1
HDAC3-211ENST00000491581 POLQO75417 2590 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 C15orf38-AP3S2A0A0A6YYH1 394 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 A0A1W2PPM1 405 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 FOXE1O00358 373 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-211ENST00000491581 AQP7O14520 342 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 UBFD1O14562 309 aaKnown RBP8.15□□□□□ -1.1
HDAC3-211ENST00000491581 DLX3O60479 287 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 TRAPPC6AO75865 159 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 CBX7O95931 251 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 INHBAP08476 426 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 SLC35E2P0CK97 266 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 CPMP14384 443 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 PIK3R1P27986 724 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 HPDP32754 393 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-211ENST00000491581 PHBP35232 272 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 SLCO1A2P46721 670 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 CORO7P57737 925 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 HMGCS1Q01581 520 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 BTKQ06187 659 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 CKAP4Q07065 602 aaKnown RBP8.15□□□□□ -1.1
HDAC3-211ENST00000491581 CRYZQ08257 329 aaKnown RBP8.15□□□□□ -1.1
HDAC3-211ENST00000491581 TOMM20Q15388 145 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 TESK1Q15569 626 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 HYAL4Q2M3T9 481 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 PRICKLE4Q2TBC4 344 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 OR5M10Q6IEU7 315 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 OR52E8Q6IFG1 317 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 KLC3Q6P597 504 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 POMZP3Q6PJE2 187 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 B3GNT6Q6ZMB0 384 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 TMEM200AQ86VY9 491 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 GALNT12Q8IXK2 581 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 ULK2Q8IYT8 1036 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 METTL4Q8N3J2 472 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 OR4N2Q8NGD1 307 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 OR4K14Q8NGD5 310 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 NEIL3Q8TAT5 605 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 SPPL2AQ8TCT8 520 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 CHTF18Q8WVB6 975 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 SELENOMQ8WWX9 145 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 KAT2AQ92830 837 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 C14orf79Q96F83 325 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 APIPQ96GX9 242 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 SGCZQ96LD1 299 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 FMO2Q99518 471 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 NTMT1Q9BV86 223 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 FUT8Q9BYC5 575 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 SHCBP1LQ9BZQ2 653 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 EPB41L4BQ9H329 900 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 MCCC2Q9HCC0 563 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 KCNJ16Q9NPI9 418 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 MS4A12Q9NXJ0 267 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 FLRT3Q9NZU0 649 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 TBK1Q9UHD2 729 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 BCAP29Q9UHQ4 241 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 MAPRE3Q9UPY8 281 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 PLLPQ9Y342 182 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 TSC22D4Q9Y3Q8 395 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 PCDHA9Q9Y5H5 950 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 NPFFR2Q9Y5X5 522 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 PTGDR2Q9Y5Y4 395 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 CREBBPQ92793 2442 aa8.15□□□□□ -1.1
HDAC3-211ENST00000491581 INTS1Q8N201 2190 aaKnown RBP8.15□□□□□ -1.11
HDAC3-211ENST00000491581 STX16-NPEPL1H3BU86 382 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 MANBAO00462 879 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 STX16O14662 325 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 SMIM24O75264 130 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 UGT2B11O75310 529 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 SUPT7LO94864 414 aa8.14□□□□□ -1.11
HDAC3-211ENST00000491581 SHBGP04278 402 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms