RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	SPACA9	Q96E40	222 aa	Predicted RBP	10.25	□□□□□ -0.77
GGA1-222	ENST00000489772	CNRIP1	Q96F85	164 aa	Predicted RBP	10.25	□□□□□ -0.77
GGA1-222	ENST00000489772	ZNF681	Q96N22	645 aa		10.25	□□□□□ -0.77
GGA1-222	ENST00000489772	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	10.25	□□□□□ -0.77
GGA1-222	ENST00000489772	LRTM1	Q9HBL6	345 aa		10.25	□□□□□ -0.77
GGA1-222	ENST00000489772	SLC35C2	Q9NQQ7	365 aa		10.25	□□□□□ -0.77
GGA1-222	ENST00000489772	SACM1L	Q9NTJ5	587 aa		10.25	□□□□□ -0.77
GGA1-222	ENST00000489772	C1orf109	Q9NX04	203 aa		10.25	□□□□□ -0.77
GGA1-222	ENST00000489772	EHD3	Q9NZN3	535 aa		10.25	□□□□□ -0.77
GGA1-222	ENST00000489772	ERRFI1	Q9UJM3	462 aa	Predicted RBP	10.25	□□□□□ -0.77
GGA1-222	ENST00000489772	CFL2	Q9Y281	166 aa		10.25	□□□□□ -0.77
GGA1-222	ENST00000489772	TRAF6	Q9Y4K3	522 aa		10.25	□□□□□ -0.77
GGA1-222	ENST00000489772	CCL27	Q9Y4X3	112 aa		10.25	□□□□□ -0.77
GGA1-222	ENST00000489772	POLR3H	Q9Y535	204 aa	Predicted RBP	10.25	□□□□□ -0.77
GGA1-222	ENST00000489772	SHANK1	Q9Y566	2161 aa		10.25	□□□□□ -0.77
GGA1-222	ENST00000489772	DNAJC15	Q9Y5T4	150 aa		10.25	□□□□□ -0.77
GGA1-222	ENST00000489772	CAPN14	A8MX76	684 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	NPIPB8	E9PQR5	432 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	TFEC	O14948	347 aa	Predicted RBP	10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	TM9SF1	O15321	606 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	LRRTM2	O43300	516 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	ASNA1	O43681	348 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	ZNF354A	O60765	605 aa	Predicted RBP	10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	STS	P08842	583 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	FBXO45	P0C2W1	286 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	LINC00032	P0C843	101 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	CNR1	P21554	472 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	MPI	P34949	423 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	ETV4	P43268	484 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	SERPINB4	P48594	390 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	CASP6	P55212	293 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	NRG3	P56975	720 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	C2orf80	Q0P641	193 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	MGAT2	Q10469	447 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	ZNF791	Q3KP31	576 aa	Predicted RBP	10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	SH2D4B	Q5SQS7	431 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	BNC2	Q6ZN30	1099 aa	Predicted RBP	10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	ZCCHC23	Q6ZST2	131 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	IKBIP	Q70UQ0	350 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	NUDCD3	Q8IVD9	361 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	SIAH3	Q8IW03	269 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	DDIAS	Q8IXT1	998 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	CCDC116	Q8IYX3	515 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	ZNF441	Q8N8Z8	693 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	ZFP62	Q8NB50	900 aa	Predicted RBP	10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	C17orf47	Q8NEP4	570 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	ADCY4	Q8NFM4	1077 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	C16orf52	Q8NHV5	167 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	PGM2	Q96G03	612 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	STMN4	Q9H169	189 aa	Predicted RBP	10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	MYNN	Q9NPC7	610 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	MIEF1	Q9NQG6	463 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	MAT2B	Q9NZL9	334 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	PRODH2	Q9UF12	536 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	BCAP29	Q9UHQ4	241 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	PTGDR2	Q9Y5Y4	395 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	ACTL7B	Q9Y614	415 aa		10.24	□□□□□ -0.77
GGA1-222	ENST00000489772	USP9Y	O00507	2555 aa	Predicted RBP	10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	TRGV8	A0A0C4DH27	118 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	WDR91	A4D1P6	747 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	TMEM233	B4DJY2	109 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	ACOT7	O00154	380 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	BIRC5	O15392	142 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	SLC19A2	O60779	497 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	BCAS2	O75934	225 aa	Predicted RBP	10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	ZWINT	O95229	277 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	NADK	O95544	446 aa	Predicted RBP	10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	S1PR1	P21453	382 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	PTGER1	P34995	402 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	RFC3	P40938	356 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	NR0B1	P51843	470 aa	Known RBP	10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	PER3	P56645	1201 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	PLGLB1	Q02325	96 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	KIAA0040	Q15053	153 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	ZNF628	Q5EBL2	1059 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	TNFAIP8L3	Q5GJ75	292 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	RNFT1	Q5M7Z0	435 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	C1QL3	Q5VWW1	255 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	SLC22A10	Q63ZE4	541 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	FAM71E1	Q6IPT2	247 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	FAM111B	Q6SJ93	734 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	RGS9BP	Q6ZS82	235 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	GK5	Q6ZS86	529 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772		Q6ZSR9	355 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	FAM47E	Q6ZV65	393 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	TICAM1	Q8IUC6	712 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	GHDC	Q8N2G8	530 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	OR2M7	Q8NG81	312 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	OR52R1	Q8NGF1	315 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	AGR3	Q8TD06	166 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	TWIST2	Q8WVJ9	160 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	ADIPOR1	Q96A54	375 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	ZBTB9	Q96C00	473 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	CTHRC1	Q96CG8	243 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	ERP27	Q96DN0	273 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	MAGED4	Q96JG8	741 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	PSMG3-AS1	Q96PY0	264 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	BBS4	Q96RK4	519 aa		10.23	□□□□□ -0.77
GGA1-222	ENST00000489772	CCT7	Q99832	543 aa		10.23	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms