RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 PRSS44E7EML9 344 aa16.44■□□□□ 0.22
ABCF3-217ENST00000489719 ATP1B1P05026 303 aa16.44■□□□□ 0.22
ABCF3-217ENST00000489719 TPOP07202 933 aa16.44■□□□□ 0.22
ABCF3-217ENST00000489719 IL3P08700 152 aa16.44■□□□□ 0.22
ABCF3-217ENST00000489719 ANXA4P09525 319 aaPredicted RBP16.44■□□□□ 0.22
ABCF3-217ENST00000489719 KCNJ2P63252 427 aa16.44■□□□□ 0.22
ABCF3-217ENST00000489719 LIPMQ5VYY2 423 aa16.44■□□□□ 0.22
ABCF3-217ENST00000489719 ZNF787Q6DD87 383 aa16.44■□□□□ 0.22
ABCF3-217ENST00000489719 LYPD8Q6UX82 237 aa16.44■□□□□ 0.22
ABCF3-217ENST00000489719 FRMD7Q6ZUT3 714 aa16.44■□□□□ 0.22
ABCF3-217ENST00000489719 FGD2Q7Z6J4 655 aa16.44■□□□□ 0.22
ABCF3-217ENST00000489719 CHERPQ8IWX8 916 aaKnown RBP16.44■□□□□ 0.22
ABCF3-217ENST00000489719 SLC34A3Q8N130 599 aa16.44■□□□□ 0.22
ABCF3-217ENST00000489719 VWA5B2Q8N398 1253 aa16.44■□□□□ 0.22
ABCF3-217ENST00000489719 FAM57AQ8TBR7 257 aa16.44■□□□□ 0.22
ABCF3-217ENST00000489719 C16orf78Q8WTQ4 265 aa16.44■□□□□ 0.22
ABCF3-217ENST00000489719 ROPN1BQ9BZX4 212 aaPredicted RBP16.44■□□□□ 0.22
ABCF3-217ENST00000489719 ROPN1Q9HAT0 212 aaPredicted RBP16.44■□□□□ 0.22
ABCF3-217ENST00000489719 RRAGDQ9NQL2 400 aaPredicted RBP16.44■□□□□ 0.22
ABCF3-217ENST00000489719 GIMAP4Q9NUV9 329 aa16.44■□□□□ 0.22
ABCF3-217ENST00000489719 TUBA8Q9NY65 449 aaPredicted RBP16.44■□□□□ 0.22
ABCF3-217ENST00000489719 NPFFR2Q9Y5X5 522 aa16.44■□□□□ 0.22
ABCF3-217ENST00000489719 SPTBN1Q01082 2364 aaKnown RBP16.44■□□□□ 0.22
ABCF3-217ENST00000489719 E9PLN8 166 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 TRIM13O60858 407 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 GLSO94925 669 aaPredicted RBP16.43■□□□□ 0.22
ABCF3-217ENST00000489719 NUDT17P0C025 328 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 UROSP10746 265 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 S1PR1P21453 382 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 TIA1P31483 386 aaKnown RBP eCLIP16.43■□□□□ 0.22
ABCF3-217ENST00000489719 DCTP40126 519 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 GSTM5P46439 218 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 TMED10P49755 219 aaKnown RBP16.43■□□□□ 0.22
ABCF3-217ENST00000489719 FOXA1P55317 472 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 RAE1P78406 368 aaKnown RBP16.43■□□□□ 0.22
ABCF3-217ENST00000489719 NTRK2Q16620 822 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 PRICKLE4Q2TBC4 344 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 GALNT18Q6P9A2 607 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 EMBQ6PCB8 327 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 FAM111BQ6SJ93 734 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 TMEM64Q6YI46 380 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 C10orf107Q8IVU9 208 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 CCDC116Q8IYX3 515 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 LRRC25Q8N386 305 aaPredicted RBP16.43■□□□□ 0.22
ABCF3-217ENST00000489719 FAM109AQ8N4B1 249 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 TMEM251Q8N6I4 163 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 ZNF441Q8N8Z8 693 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 ADCY4Q8NFM4 1077 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 OR10G3Q8NGC4 313 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 ADIPOR1Q96A54 375 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 CNRIP1Q96F85 164 aaPredicted RBP16.43■□□□□ 0.22
ABCF3-217ENST00000489719 PHF12Q96QT6 1004 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 VKORC1Q9BQB6 163 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 SHCBP1LQ9BZQ2 653 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 LDAHQ9H6V9 325 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 ZDHHC11Q9H8X9 412 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 SH2D2AQ9NP31 389 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 PLSCR2Q9NRY7 297 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 HEY2Q9UBP5 337 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 BOKQ9UMX3 212 aaPredicted RBP16.43■□□□□ 0.22
ABCF3-217ENST00000489719 PLLPQ9Y342 182 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 DOPEY1Q5JWR5 2465 aa16.43■□□□□ 0.22
ABCF3-217ENST00000489719 ATP6AP2A0A1C7CYW4 349 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 ZNF500O60304 480 aaPredicted RBP16.42■□□□□ 0.22
ABCF3-217ENST00000489719 ATP6AP2O75787 350 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 AGAP20933 346 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 MAGEA5P43359 124 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 RPP38P78345 283 aaKnown RBP16.42■□□□□ 0.22
ABCF3-217ENST00000489719 C2orf80Q0P641 193 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 MGAT2Q10469 447 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 FOXO1Q12778 655 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 HYAL4Q2M3T9 481 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 PRAMEF20Q5VT98 475 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 TMEM211Q6ICI0 200 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 FAM180BQ6P0A1 224 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 WDR93Q6P2C0 686 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 C3P1Q6ZMU1 363 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 TRIM46Q7Z4K8 759 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 FBXW8Q8N3Y1 598 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 C17orf47Q8NEP4 570 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 DIO2Q92813 273 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 EXOSC8Q96B26 276 aaKnown RBP16.42■□□□□ 0.22
ABCF3-217ENST00000489719 JSRP1Q96MG2 331 aaPredicted RBP16.42■□□□□ 0.22
ABCF3-217ENST00000489719 ZNF681Q96N22 645 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 EBPLQ9BY08 206 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 EXO5Q9H790 373 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 ZFP64Q9NPA5 681 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 SIRT5Q9NXA8 310 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 MAT2BQ9NZL9 334 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 PRODH2Q9UF12 536 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 ENTPD4Q9Y227 616 aa16.42■□□□□ 0.22
ABCF3-217ENST00000489719 KLF2Q9Y5W3 355 aaPredicted RBP16.42■□□□□ 0.22
ABCF3-217ENST00000489719 NPIPA2E9PIF3 369 aa16.41■□□□□ 0.22
ABCF3-217ENST00000489719 NPIPA3F8WFD2 350 aa16.41■□□□□ 0.22
ABCF3-217ENST00000489719 BCAS2O75934 225 aaPredicted RBP16.41■□□□□ 0.22
ABCF3-217ENST00000489719 MPIP34949 423 aa16.41■□□□□ 0.22
ABCF3-217ENST00000489719 ADORA2A-AS1P86434 159 aa16.41■□□□□ 0.22
ABCF3-217ENST00000489719 EXOSC7Q15024 291 aaKnown RBP16.41■□□□□ 0.22
ABCF3-217ENST00000489719 TRMT12Q53H54 448 aaKnown RBP16.41■□□□□ 0.22
ABCF3-217ENST00000489719 TBCELQ5QJ74 424 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms