RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 SIGLEC12Q96PQ1 595 aa17.29■□□□□ 0.36
PTCD3-217ENST00000488801 BARD1Q99728 777 aaKnown RBP17.29■□□□□ 0.36
PTCD3-217ENST00000488801 WWTR1Q9GZV5 400 aa17.29■□□□□ 0.36
PTCD3-217ENST00000488801 MIEF1Q9NQG6 463 aa17.29■□□□□ 0.36
PTCD3-217ENST00000488801 RYDENQ9NUL5 291 aaKnown RBP17.29■□□□□ 0.36
PTCD3-217ENST00000488801 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.29■□□□□ 0.36
PTCD3-217ENST00000488801 ABI3Q9P2A4 366 aa17.29■□□□□ 0.36
PTCD3-217ENST00000488801 BAIAP2L1Q9UHR4 511 aa17.29■□□□□ 0.36
PTCD3-217ENST00000488801 ATP6V1HQ9UI12 483 aa17.29■□□□□ 0.36
PTCD3-217ENST00000488801 ENTPD4Q9Y227 616 aa17.29■□□□□ 0.36
PTCD3-217ENST00000488801 UBR5O95071 2799 aaPredicted RBP17.29■□□□□ 0.36
PTCD3-217ENST00000488801 GCN1Q92616 2671 aaKnown RBP17.29■□□□□ 0.36
PTCD3-217ENST00000488801 TRAV17A0A0B4J275 112 aa17.28■□□□□ 0.36
PTCD3-217ENST00000488801 FCHO1O14526 889 aa17.28■□□□□ 0.36
PTCD3-217ENST00000488801 SCAMP2O15127 329 aaKnown RBP17.28■□□□□ 0.36
PTCD3-217ENST00000488801 ATP8B1O43520 1251 aa17.28■□□□□ 0.36
PTCD3-217ENST00000488801 VPS4BO75351 444 aa17.28■□□□□ 0.36
PTCD3-217ENST00000488801 F10P00742 488 aa17.28■□□□□ 0.36
PTCD3-217ENST00000488801 NT5EP21589 574 aa17.28■□□□□ 0.36
PTCD3-217ENST00000488801 PTGER1P34995 402 aa17.28■□□□□ 0.36
PTCD3-217ENST00000488801 CD96P40200 585 aa17.28■□□□□ 0.36
PTCD3-217ENST00000488801 HLCSP50747 726 aa17.28■□□□□ 0.36
PTCD3-217ENST00000488801 IL23RQ5VWK5 629 aa17.28■□□□□ 0.36
PTCD3-217ENST00000488801 FAM111BQ6SJ93 734 aa17.28■□□□□ 0.36
PTCD3-217ENST00000488801 LYPD8Q6UX82 237 aa17.28■□□□□ 0.36
PTCD3-217ENST00000488801 C16orf47Q6ZP98 133 aaPredicted RBP17.28■□□□□ 0.36
PTCD3-217ENST00000488801 WDR75Q8IWA0 830 aaKnown RBP17.28■□□□□ 0.36
PTCD3-217ENST00000488801 CCDC116Q8IYX3 515 aa17.28■□□□□ 0.36
PTCD3-217ENST00000488801 SIMC1Q8NDZ2 872 aa17.28■□□□□ 0.36
PTCD3-217ENST00000488801 OR5L2Q8NGL0 311 aa17.28■□□□□ 0.36
PTCD3-217ENST00000488801 OR9A2Q8NGT5 310 aa17.28■□□□□ 0.36
PTCD3-217ENST00000488801 CLHC1Q8NHS4 586 aa17.28■□□□□ 0.36
PTCD3-217ENST00000488801 THAP3Q8WTV1 239 aaPredicted RBP17.28■□□□□ 0.36
PTCD3-217ENST00000488801 CKAP2Q8WWK9 683 aa17.28■□□□□ 0.36
PTCD3-217ENST00000488801 RASL10BQ96S79 203 aa17.28■□□□□ 0.36
PTCD3-217ENST00000488801 UTP23Q9BRU9 249 aaKnown RBP17.28■□□□□ 0.36
PTCD3-217ENST00000488801 OR10A5Q9H207 317 aa17.28■□□□□ 0.36
PTCD3-217ENST00000488801 GIMAP4Q9NUV9 329 aa17.28■□□□□ 0.36
PTCD3-217ENST00000488801 INTS9Q9NV88 658 aaKnown RBP17.28■□□□□ 0.36
PTCD3-217ENST00000488801 NOP53Q9NZM5 478 aaKnown RBP17.28■□□□□ 0.36
PTCD3-217ENST00000488801 MARCOQ9UEW3 520 aaPredicted RBP17.28■□□□□ 0.36
PTCD3-217ENST00000488801 YARS2Q9Y2Z4 477 aaKnown RBP17.28■□□□□ 0.36
PTCD3-217ENST00000488801 HEMK1Q9Y5R4 338 aaPredicted RBP17.28■□□□□ 0.36
PTCD3-217ENST00000488801 SLCO1B7G3V0H7 640 aa17.27■□□□□ 0.36
PTCD3-217ENST00000488801 ANKRD28O15084 1053 aa17.27■□□□□ 0.36
PTCD3-217ENST00000488801 OR2J2O76002 312 aa17.27■□□□□ 0.36
PTCD3-217ENST00000488801 SLITRK5O94991 958 aa17.27■□□□□ 0.36
PTCD3-217ENST00000488801 PSMG1O95456 288 aa17.27■□□□□ 0.36
PTCD3-217ENST00000488801 MRPS35P82673 323 aaKnown RBP17.27■□□□□ 0.36
PTCD3-217ENST00000488801 INAQ16352 499 aa17.27■□□□□ 0.36
PTCD3-217ENST00000488801 CAMKMTQ7Z624 323 aa17.27■□□□□ 0.36
PTCD3-217ENST00000488801 FAM9CQ8IZT9 166 aa17.27■□□□□ 0.36
PTCD3-217ENST00000488801 C17orf47Q8NEP4 570 aa17.27■□□□□ 0.36
PTCD3-217ENST00000488801 ADCY4Q8NFM4 1077 aa17.27■□□□□ 0.36
PTCD3-217ENST00000488801 C16orf52Q8NHV5 167 aa17.27■□□□□ 0.36
PTCD3-217ENST00000488801 LRRC8CQ8TDW0 803 aa17.27■□□□□ 0.36
PTCD3-217ENST00000488801 GFM2Q969S9 779 aaKnown RBP17.27■□□□□ 0.36
PTCD3-217ENST00000488801 ADIPOR1Q96A54 375 aa17.27■□□□□ 0.36
PTCD3-217ENST00000488801 PPP1R36Q96LQ0 422 aa17.27■□□□□ 0.36
PTCD3-217ENST00000488801 MAGEB18Q96M61 343 aa17.27■□□□□ 0.36
PTCD3-217ENST00000488801 AMDHD1Q96NU7 426 aa17.27■□□□□ 0.36
PTCD3-217ENST00000488801 GLIPR2Q9H4G4 154 aa17.27■□□□□ 0.36
PTCD3-217ENST00000488801 LIN28AQ9H9Z2 209 aaKnown RBP17.27■□□□□ 0.36
PTCD3-217ENST00000488801 SLCO1B3Q9NPD5 702 aa17.27■□□□□ 0.36
PTCD3-217ENST00000488801 LUZP4Q9P127 313 aa17.27■□□□□ 0.36
PTCD3-217ENST00000488801 DTX4Q9Y2E6 619 aa17.27■□□□□ 0.36
PTCD3-217ENST00000488801 PCNX3Q9H6A9 2034 aa17.26■□□□□ 0.35
PTCD3-217ENST00000488801 TRPC5OSA6NMA1 111 aa17.26■□□□□ 0.35
PTCD3-217ENST00000488801 PLOD3O60568 738 aa17.26■□□□□ 0.35
PTCD3-217ENST00000488801 PRAMEF2O60811 474 aa17.26■□□□□ 0.35
PTCD3-217ENST00000488801 LRATO95237 230 aa17.26■□□□□ 0.35
PTCD3-217ENST00000488801 ALDOCP09972 364 aaKnown RBP17.26■□□□□ 0.35
PTCD3-217ENST00000488801 G6PDP11413 515 aa17.26■□□□□ 0.35
PTCD3-217ENST00000488801 PCSK2P16519 638 aa17.26■□□□□ 0.35
PTCD3-217ENST00000488801 GPX3P22352 226 aa17.26■□□□□ 0.35
PTCD3-217ENST00000488801 SSR4P51571 173 aa17.26■□□□□ 0.35
PTCD3-217ENST00000488801 DIO3P55073 304 aa17.26■□□□□ 0.35
PTCD3-217ENST00000488801 OR1C1Q15619 314 aa17.26■□□□□ 0.35
PTCD3-217ENST00000488801 TRMT12Q53H54 448 aaKnown RBP17.26■□□□□ 0.35
PTCD3-217ENST00000488801 PRR30Q53SZ7 412 aaPredicted RBP17.26■□□□□ 0.35
PTCD3-217ENST00000488801 PIGGQ5H8A4 983 aa17.26■□□□□ 0.35
PTCD3-217ENST00000488801 C6orf163Q5TEZ5 329 aa17.26■□□□□ 0.35
PTCD3-217ENST00000488801 ANKRD26P1Q6NSI1 321 aa17.26■□□□□ 0.35
PTCD3-217ENST00000488801 GPALPP1Q8IXQ4 340 aa17.26■□□□□ 0.35
PTCD3-217ENST00000488801 BRINP2Q9C0B6 783 aa17.26■□□□□ 0.35
PTCD3-217ENST00000488801 MED4Q9NPJ6 270 aa17.26■□□□□ 0.35
PTCD3-217ENST00000488801 NTNG1Q9Y2I2 539 aa17.26■□□□□ 0.35
PTCD3-217ENST00000488801 FLNCQ14315 2725 aa17.25■□□□□ 0.35
PTCD3-217ENST00000488801 A0A087WV62 115 aa17.25■□□□□ 0.35
PTCD3-217ENST00000488801 WWP2O00308 870 aa17.25■□□□□ 0.35
PTCD3-217ENST00000488801 PLOD2O00469 737 aa17.25■□□□□ 0.35
PTCD3-217ENST00000488801 PDPK1O15530 556 aa17.25■□□□□ 0.35
PTCD3-217ENST00000488801 AKAP10O43572 662 aa17.25■□□□□ 0.35
PTCD3-217ENST00000488801 SLC28A2O43868 658 aa17.25■□□□□ 0.35
PTCD3-217ENST00000488801 LBPP18428 481 aa17.25■□□□□ 0.35
PTCD3-217ENST00000488801 NTSP30990 170 aa17.25■□□□□ 0.35
PTCD3-217ENST00000488801 MPIP34949 423 aa17.25■□□□□ 0.35
PTCD3-217ENST00000488801 HPCAL1P37235 193 aa17.25■□□□□ 0.35
PTCD3-217ENST00000488801 RPL3P39023 403 aaKnown RBP17.25■□□□□ 0.35
PTCD3-217ENST00000488801 SOX3P41225 446 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms