RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 FNDC7Q5VTL7 733 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 FAM219BQ5XKK7 198 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 HLA-DQA1Q5Y7H0 255 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 TTC19Q6DKK2 380 aaPredicted RBP11.18□□□□□ -0.62
VPS16-208ENST00000487461 C8orf74Q6P047 294 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 RPS27LQ71UM5 84 aaKnown RBP11.18□□□□□ -0.62
VPS16-208ENST00000487461 MILR1Q7Z6M3 343 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 TMEM200AQ86VY9 491 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 RELL1Q8IUW5 271 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 GALNT12Q8IXK2 581 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 PRR22Q8IZ63 422 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 LIX1Q8N485 282 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 MYRIPQ8NFW9 859 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 ISL2Q96A47 359 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 TRIM44Q96DX7 344 aaPredicted RBP11.18□□□□□ -0.62
VPS16-208ENST00000487461 GNRHR2Q96P88 292 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 TIMP4Q99727 224 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 ANGPTL4Q9BY76 406 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 FUT8Q9BYC5 575 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 SLC24A3Q9HC58 644 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 B4GALT7Q9UBV7 327 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 ADAM29Q9UKF5 820 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 CES1P1Q9UKY3 287 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 FREM3P0C091 2139 aa11.18□□□□□ -0.62
VPS16-208ENST00000487461 C15orf38-AP3S2A0A0A6YYH1 394 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 HSPB2A8KAH6 182 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 FAM47E-STBD1D6RA91 191 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 SYT5O00445 386 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 CTAG2O75638 210 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 SNX4O95219 450 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 ZWINTO95229 277 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 EPPINO95925 133 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 HPNP05981 417 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 ABCB1P08183 1280 aaPredicted RBP11.17□□□□□ -0.62
VPS16-208ENST00000487461 INHBAP08476 426 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 PORP16435 677 aaPredicted RBP11.17□□□□□ -0.62
VPS16-208ENST00000487461 DNAJA1P31689 397 aaKnown RBP11.17□□□□□ -0.62
VPS16-208ENST00000487461 CEACAM8P31997 349 aaPredicted RBP11.17□□□□□ -0.62
VPS16-208ENST00000487461 CASP3P42574 277 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 CDK9P50750 372 aaKnown RBP11.17□□□□□ -0.62
VPS16-208ENST00000487461 CRYZQ08257 329 aaKnown RBP11.17□□□□□ -0.62
VPS16-208ENST00000487461 MGAT2Q10469 447 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 RPS6KA2Q15349 733 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 HSPB2Q16082 182 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 DESI1Q6ICB0 168 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 POMZP3Q6PJE2 187 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 FAM111BQ6SJ93 734 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 MMP21Q8N119 569 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 METTL4Q8N3J2 472 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 TMEM151AQ8N4L1 468 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 RELL2Q8NC24 303 aaPredicted RBP11.17□□□□□ -0.62
VPS16-208ENST00000487461 NAXEQ8NCW5 288 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 TNIP2Q8NFZ5 429 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 OR7G1Q8NGA0 311 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 OR4F6Q8NGB9 312 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 TM4SF18Q96CE8 201 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 NTNG2Q96CW9 530 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 ZNF597Q96LX8 424 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 RILPQ96NA2 401 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 SECISBP2Q96T21 854 aaKnown RBP11.17□□□□□ -0.62
VPS16-208ENST00000487461 NXF5Q9H1B4 397 aaKnown RBP11.17□□□□□ -0.62
VPS16-208ENST00000487461 UBQLN3Q9H347 655 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 RRAGDQ9NQL2 400 aaPredicted RBP11.17□□□□□ -0.62
VPS16-208ENST00000487461 FARSBQ9NSD9 589 aaKnown RBP11.17□□□□□ -0.62
VPS16-208ENST00000487461 AHSPQ9NZD4 102 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 XPR1Q9UBH6 696 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 TMCO1Q9UM00 188 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 PCDHA9Q9Y5H5 950 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 IKBKGQ9Y6K9 419 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 AKAP6Q13023 2319 aa11.17□□□□□ -0.62
VPS16-208ENST00000487461 PRRC2AP48634 2157 aaKnown RBP11.16□□□□□ -0.62
VPS16-208ENST00000487461 ESPNB1AK53 854 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 SMIM24O75264 130 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 PDYNP01213 254 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 SBK3P0C264 359 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 COL6A2P12110 1019 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 TSPAN8P19075 237 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 GPX3P22352 226 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 ABCD3P28288 659 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 SOX18P35713 384 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 FEN1P39748 380 aaKnown RBP11.16□□□□□ -0.62
VPS16-208ENST00000487461 KIR2DL3P43628 341 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 ART1P52961 327 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 MAPK12P53778 367 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 CDH13P55290 713 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 NRG3P56975 720 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 CKAP4Q07065 602 aaKnown RBP11.16□□□□□ -0.62
VPS16-208ENST00000487461 GALNT1Q10472 559 aaPredicted RBP11.16□□□□□ -0.62
VPS16-208ENST00000487461 MAP4K2Q12851 820 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 IFT88Q13099 833 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 PRICKLE4Q2TBC4 344 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 GGTA1PQ4G0N0 100 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 ACSF3Q4G176 576 aaPredicted RBP11.16□□□□□ -0.62
VPS16-208ENST00000487461 EIPR1Q53HC9 387 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 C10orf62Q5T681 223 aaPredicted RBP11.16□□□□□ -0.62
VPS16-208ENST00000487461 VASNQ6EMK4 673 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 PAGE2Q7Z2X7 111 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 COMMD6Q7Z4G1 85 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 PACS2Q86VP3 889 aa11.16□□□□□ -0.62
VPS16-208ENST00000487461 ZZZ3Q8IYH5 903 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms