RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 OSMP13725 252 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 CASRP41180 1078 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 LRIT3Q3SXY7 679 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 MLIPQ5VWP3 458 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 OR8D2Q9GZM6 311 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 B3GAT2Q9NPZ5 323 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 HRASLS2Q9NWW9 162 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 C5P01031 1676 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 M0QZQ0 153 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 ACVR1BP36896 505 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 OPRL1P41146 370 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 GPR143P51810 404 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 RPS21P63220 83 aaKnown RBP15.69■□□□□ 0.1
COL7A1-210ENST00000487017 OR52E8Q6IFG1 317 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 KCTD18Q6PI47 426 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-210ENST00000487017 LRRN1Q6UXK5 716 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 TSPAN33Q86UF1 283 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 POGLUT1Q8NBL1 392 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 RTCAO00442 366 aaKnown RBP15.69■□□□□ 0.1
COL7A1-210ENST00000487017 PLD2O14939 933 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 GKN3PP0CG01 181 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 MTNR1AP48039 350 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 ZNF41P51814 821 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-210ENST00000487017 CATSPEREQ5SY80 951 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 ZFP41Q8N8Y5 198 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 HDHD5Q9BXW7 423 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 KCNK12Q9HB15 430 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 ENPP5Q9UJA9 477 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 TCRBV3S1A0A5B6 114 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 NARSO43776 548 aaKnown RBP15.68■□□□□ 0.1
COL7A1-210ENST00000487017 PAK4O96013 591 aaPredicted RBP15.68■□□□□ 0.1
COL7A1-210ENST00000487017 PIM1P11309 404 aaPredicted RBP15.68■□□□□ 0.1
COL7A1-210ENST00000487017 VSX2P58304 361 aaPredicted RBP15.68■□□□□ 0.1
COL7A1-210ENST00000487017 NTRK2Q16620 822 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 ALG10Q5BKT4 473 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 RTP2Q5QGT7 225 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 CRTC1Q6UUV9 634 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 LARP4Q71RC2 724 aaKnown RBP eCLIP15.68■□□□□ 0.1
COL7A1-210ENST00000487017 KCNN1Q92952 543 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 METTL7AQ9H8H3 244 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 GNSP15586 552 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 GPR4P46093 362 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 TAS2R38P59533 333 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 TEX26Q8N6G2 289 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 DTX3Q8N9I9 347 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 OR6N1Q8NGY5 312 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 VNN3Q9NY84 501 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 GMEB2Q9UKD1 530 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 MAGED1Q9Y5V3 778 aaPredicted RBP15.68■□□□□ 0.1
COL7A1-210ENST00000487017 LAMB4A4D0S4 1761 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 A0A1B0GVC2 190 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 RHOP08100 348 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 AK4P27144 223 aaPredicted RBP15.68■□□□□ 0.1
COL7A1-210ENST00000487017 FAM189BP81408 668 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 ATXN7L3Q14CW9 347 aaPredicted RBP15.68■□□□□ 0.1
COL7A1-210ENST00000487017 ARHGAP11AQ6P4F7 1023 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 BEND4Q6ZU67 534 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 COMMD6Q7Z4G1 85 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 ZNF611Q8N823 705 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 SLC22A8Q8TCC7 542 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 FOLH1BQ9HBA9 442 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 FBXL3Q9UKT7 428 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 BACE2Q9Y5Z0 518 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 TRBV2A0A0J9YWF9 115 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 C9J4A7 227 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 LCKP06239 509 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 UGT2B10P36537 528 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 ZXDBP98169 803 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 GRM2Q14416 872 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 DEFB119Q8N690 84 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 OR4K3Q96R72 315 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 TREX1Q9NSU2 369 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 GSKIPQ9P0R6 139 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 SLCO3A1Q9UIG8 710 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 INTS6Q9UL03 887 aaKnown RBP15.68■□□□□ 0.1
COL7A1-210ENST00000487017 CEPT1Q9Y6K0 416 aa15.68■□□□□ 0.1
COL7A1-210ENST00000487017 NUAK1O60285 661 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 MECP2P51608 486 aaKnown RBP15.67■□□□□ 0.1
COL7A1-210ENST00000487017 NAGSQ8N159 534 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 SCRN2Q96FV2 425 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 SGIP1Q9BQI5 828 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 DPH7Q9BTV6 452 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 RBCK1Q9BYM8 510 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 DCAF13Q9NV06 445 aaKnown RBP15.67■□□□□ 0.1
COL7A1-210ENST00000487017 GJD2Q9UKL4 321 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 LRRTM2O43300 516 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 GLP1RP43220 463 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 RNF144AP50876 292 aaPredicted RBP15.67■□□□□ 0.1
COL7A1-210ENST00000487017 SNTB2Q13425 540 aaKnown RBP15.67■□□□□ 0.1
COL7A1-210ENST00000487017 DEFB134Q4QY38 66 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 OR4K5Q8NGD3 323 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 LMX1AQ8TE12 382 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 SLC2A11Q9BYW1 496 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 TMEM168Q9H0V1 697 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 ATG5Q9H1Y0 275 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 MEIS3P2A8K0S8 358 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 AK1P00568 194 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 TNFRSF1BP20333 461 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 FNTBP49356 437 aa15.67■□□□□ 0.1
COL7A1-210ENST00000487017 SELENOWP63302 87 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms