RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 STXBP1P61764 594 aaKnown RBP11.73□□□□□ -0.53
HSPG2-211ENST00000486901 FCN2Q15485 313 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 ZSWIM7Q19AV6 140 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 SYT14P1Q58G82 188 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 LIPJQ5W064 366 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 ASTLQ6HA08 431 aaPredicted RBP11.73□□□□□ -0.53
HSPG2-211ENST00000486901 PGBD2Q6P3X8 592 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 ZER1Q7Z7L7 766 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 TMEM25Q86YD3 366 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 OR4K5Q8NGD3 323 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 ZG16BQ96DA0 208 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 SENP5Q96HI0 755 aaPredicted RBP11.73□□□□□ -0.53
HSPG2-211ENST00000486901 TRMT61BQ9BVS5 477 aaKnown RBP11.73□□□□□ -0.53
HSPG2-211ENST00000486901 C3orf14Q9HBI5 128 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 TAAR2Q9P1P5 351 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 CATP04040 527 aaKnown RBP11.73□□□□□ -0.53
HSPG2-211ENST00000486901 NR2F1P10589 423 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 FUT1P19526 365 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 ENDOUP21128 410 aaKnown RBP11.73□□□□□ -0.53
HSPG2-211ENST00000486901 ASMTP46597 345 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 AGFG1P52594 562 aaKnown RBP11.73□□□□□ -0.53
HSPG2-211ENST00000486901 FCRLBQ6BAA4 426 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 REEP3Q6NUK4 255 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 TMEM150AQ86TG1 271 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 SIMC1Q8NDZ2 872 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 VN1R3Q9BXE9 311 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 RNF208Q9H0X6 261 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 OR2AG1Q9H205 316 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 MED20Q9H944 212 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 ZFR2Q9UPR6 939 aaKnown RBP11.73□□□□□ -0.53
HSPG2-211ENST00000486901 RPL36Q9Y3U8 105 aaKnown RBP11.73□□□□□ -0.53
HSPG2-211ENST00000486901 CSNK1G3Q9Y6M4 447 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 SCN3AQ9NY46 2000 aa11.73□□□□□ -0.53
HSPG2-211ENST00000486901 ANTXRLA6NF34 631 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 CPSF4LA6NMK7 179 aaKnown RBP11.72□□□□□ -0.53
HSPG2-211ENST00000486901 INMT-MINDY4F8WBC2 141 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 LATO43561 262 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 B4GALT2O60909 372 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 SNRPD1P62314 119 aaKnown RBP11.72□□□□□ -0.53
HSPG2-211ENST00000486901 FGFBP1Q14512 234 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 GGTA1PQ4G0N0 100 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 TRIM69Q86WT6 500 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 KLBQ86Z14 1044 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 MSANTD3Q96H12 275 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 ZFP3Q96NJ6 502 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 FNDC11Q9BVV2 318 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 STMN3Q9NZ72 180 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 PRELID1Q9Y255 219 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 MAGEB4O15481 346 aaPredicted RBP11.72□□□□□ -0.53
HSPG2-211ENST00000486901 MRPS14O60783 128 aaKnown RBP11.72□□□□□ -0.53
HSPG2-211ENST00000486901 HRGP04196 525 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 NR2F6P10588 404 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 ARSBP15848 533 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 TRIM71Q2Q1W2 868 aaKnown RBP11.72□□□□□ -0.53
HSPG2-211ENST00000486901 SLCO4C1Q6ZQN7 724 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 VN1R5Q7Z5H4 357 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 IFNL1Q8IU54 200 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 IZUMO1Q8IYV9 350 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 GCDHQ92947 438 aaPredicted RBP11.72□□□□□ -0.53
HSPG2-211ENST00000486901 HHIPQ96QV1 700 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 TDP1Q9NUW8 608 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 NDUFB11Q9NX14 153 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 HCN2Q9UL51 889 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 WDR87Q6ZQQ6 2873 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 HELZP42694 1942 aaKnown RBP11.72□□□□□ -0.53
HSPG2-211ENST00000486901 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.72□□□□□ -0.53
HSPG2-211ENST00000486901 RNASET2O00584 256 aaKnown RBP11.72□□□□□ -0.53
HSPG2-211ENST00000486901 GPR37L1O60883 481 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 LEFTY1O75610 366 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 NPPBP16860 134 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 DRD5P21918 477 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 PSMA3P25788 255 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 SLC9A3P48764 834 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 GZMKP49863 264 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 ACLYP53396 1101 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 CLDN2P57739 230 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 RPL6Q02878 288 aaKnown RBP11.72□□□□□ -0.53
HSPG2-211ENST00000486901 LAMTOR1Q6IAA8 161 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 GRHL2Q6ISB3 625 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 C22orf39Q6P5X5 142 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 CCDC28AQ8IWP9 274 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 OR6T1Q8NGN1 323 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 NEIL3Q8TAT5 605 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 ZNF582Q96NG8 517 aaPredicted RBP11.72□□□□□ -0.53
HSPG2-211ENST00000486901 DPCDQ9BVM2 203 aaPredicted RBP11.72□□□□□ -0.53
HSPG2-211ENST00000486901 SLA2Q9H6Q3 261 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 SLC25A19Q9HC21 320 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 ATG2BQ96BY7 2078 aa11.72□□□□□ -0.53
HSPG2-211ENST00000486901 H3BSH0 61 aa11.71□□□□□ -0.53
HSPG2-211ENST00000486901 SLC30A4O14863 429 aa11.71□□□□□ -0.53
HSPG2-211ENST00000486901 EEF1E1O43324 174 aaKnown RBP11.71□□□□□ -0.53
HSPG2-211ENST00000486901 PRKACBP22694 351 aa11.71□□□□□ -0.53
HSPG2-211ENST00000486901 CPN2P22792 545 aa11.71□□□□□ -0.53
HSPG2-211ENST00000486901 NNMTP40261 264 aa11.71□□□□□ -0.53
HSPG2-211ENST00000486901 GPR4P46093 362 aa11.71□□□□□ -0.53
HSPG2-211ENST00000486901 OR10A3P58181 314 aa11.71□□□□□ -0.53
HSPG2-211ENST00000486901 ZNF770Q6IQ21 691 aaPredicted RBP11.71□□□□□ -0.53
HSPG2-211ENST00000486901 ANKRD54Q6NXT1 300 aa11.71□□□□□ -0.53
HSPG2-211ENST00000486901 XKRXQ6PP77 449 aa11.71□□□□□ -0.53
HSPG2-211ENST00000486901 C6orf120Q7Z4R8 191 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms