RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 FAIM2Q9BWQ8 316 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 SORBS1Q9BX66 1292 aaKnown RBP15.91■□□□□ 0.14
VIM-205ENST00000485947 NPLQ9BXD5 320 aaPredicted RBP15.91■□□□□ 0.14
VIM-205ENST00000485947 LRMDAQ9H2I8 198 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 REEP4Q9H6H4 257 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 LANCL2Q9NS86 450 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 ASF1BQ9NVP2 202 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 LUZP4Q9P127 313 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 ATP6V1HQ9UI12 483 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 MRASO14807 208 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 CHST10O43529 356 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 TMPRSS11DO60235 418 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 GBAP04062 536 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 PGRP06401 933 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 IL3P08700 152 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 KRT16P08779 473 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 FAM58BPP0C7Q3 252 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 COX7A2P14406 83 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 S100A3P33764 101 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 SNRPNP63162 240 aaKnown RBP15.9■□□□□ 0.14
VIM-205ENST00000485947 BTN3A2P78410 334 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 C2orf80Q0P641 193 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 PDE7AQ13946 482 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 FAM174BQ3ZCQ3 159 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 VPS26BQ4G0F5 336 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 TIGD2Q4W5G0 525 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 ABHD17BQ5VST6 288 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 H3F3CQ6NXT2 135 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 C16orf89Q6UX73 402 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 QSOX2Q6ZRP7 698 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 LINC00696Q6ZRV3 163 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 ASRGL1Q7L266 308 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 LGI4Q8N135 537 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 KRTCAP2Q8N6L1 136 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 NATD1Q8N6N6 113 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 C7orf57Q8NEG2 295 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 OR8J2Q8NGG1 315 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 DNAJB8Q8NHS0 232 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 CDC26Q8NHZ8 85 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 ADAMTS18Q8TE60 1221 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 TM4SF18Q96CE8 201 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 KLHL29Q96CT2 875 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 ZNF354BQ96LW1 612 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 MESP1Q9BRJ9 268 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 BTBD10Q9BSF8 475 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 MMP25Q9NPA2 562 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 ATAD3AQ9NVI7 634 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 TAS2R1Q9NYW7 299 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 PTGFRNQ9P2B2 879 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 MAP10Q9P2G4 905 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 PHF11Q9UIL8 331 aa15.9■□□□□ 0.14
VIM-205ENST00000485947 ICE1Q9Y2F5 2266 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 SHANK1Q9Y566 2161 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 A0A0G2JN53 185 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 FBP2O00757 339 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 AIM2O14862 343 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 AKAP10O43572 662 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 B3GALT2O43825 422 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 JRKO75564 520 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 LRATO95237 230 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 DDAH2O95865 285 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 NPPAP01160 153 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 RNH1P13489 461 aaKnown RBP15.89■□□□□ 0.13
VIM-205ENST00000485947 DRD2P14416 443 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 CD1EP15812 388 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 CERS1P27544 350 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 KIR3DL1P43629 444 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 NUDT2P50583 147 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 TNFSF10P50591 281 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 HNRNPH2P55795 449 aaKnown RBP15.89■□□□□ 0.13
VIM-205ENST00000485947 LRRC74AQ0VAA2 488 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 ART3Q13508 389 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 ELOAQ14241 798 aaKnown RBP15.89■□□□□ 0.13
VIM-205ENST00000485947 PRR30Q53SZ7 412 aaPredicted RBP15.89■□□□□ 0.13
VIM-205ENST00000485947 SPANXN4Q5MJ08 99 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 RINLQ6ZS11 566 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 GPR180Q86V85 440 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 RBM15BQ8NDT2 890 aaKnown RBP15.89■□□□□ 0.13
VIM-205ENST00000485947 ST6GALNAC3Q8NDV1 305 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 COQ8BQ96D53 544 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 PEX11GQ96HA9 241 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 RMND5AQ9H871 391 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 MIEF1Q9NQG6 463 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 PRDM9Q9NQV7 894 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 GID8Q9NWU2 228 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 FAM120CQ9NX05 1096 aaKnown RBP15.89■□□□□ 0.13
VIM-205ENST00000485947 STMN3Q9NZ72 180 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 EHD3Q9NZN3 535 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 ABI3Q9P2A4 366 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 MMACHCQ9Y4U1 282 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 PCDHGB6Q9Y5F9 930 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 UTP20O75691 2785 aaKnown RBP15.89■□□□□ 0.13
VIM-205ENST00000485947 ESPL1Q14674 2120 aa15.89■□□□□ 0.13
VIM-205ENST00000485947 ANKRD17O75179 2603 aaKnown RBP15.89■□□□□ 0.13
VIM-205ENST00000485947 C9JVG2 144 aa15.88■□□□□ 0.13
VIM-205ENST00000485947 GYG2O15488 501 aa15.88■□□□□ 0.13
VIM-205ENST00000485947 DNAJC8O75937 253 aaPredicted RBP15.88■□□□□ 0.13
VIM-205ENST00000485947 ITGAMP11215 1152 aa15.88■□□□□ 0.13
VIM-205ENST00000485947 DDCP20711 480 aa15.88■□□□□ 0.13
VIM-205ENST00000485947 UQCRFS1P47985 274 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms