RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 MANSC1Q9H8J5 431 aa14.72□□□□□ -0.05
UPF3A-208ENST00000484246 MEAF6Q9HAF1 191 aa14.72□□□□□ -0.05
UPF3A-208ENST00000484246 LRFN1Q9P244 771 aa14.72□□□□□ -0.05
UPF3A-208ENST00000484246 CFL2Q9Y281 166 aa14.72□□□□□ -0.05
UPF3A-208ENST00000484246 ATP6AP2A0A1C7CYW4 349 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 ASPDHA6ND91 283 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 SLCO1B7G3V0H7 640 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 PLOD3O60568 738 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 PEX11AO75192 247 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 VPS4BO75351 444 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 SLC25A12O75746 678 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 ATP6AP2O75787 350 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 CBX7O95931 251 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 F10P00742 488 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 DDX5P17844 614 aaKnown RBP14.71□□□□□ -0.05
UPF3A-208ENST00000484246 NTSP30990 170 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 MPIP34949 423 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 FRKP42685 505 aaPredicted RBP14.71□□□□□ -0.05
UPF3A-208ENST00000484246 OC90Q02509 493 aaPredicted RBP14.71□□□□□ -0.05
UPF3A-208ENST00000484246 EMX2Q04743 252 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 MAD2L1Q13257 205 aaPredicted RBP14.71□□□□□ -0.05
UPF3A-208ENST00000484246 PDCD2Q16342 344 aaPredicted RBP14.71□□□□□ -0.05
UPF3A-208ENST00000484246 PRSS53Q2L4Q9 553 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 OGFOD2Q6N063 350 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 OPN5Q6U736 354 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 LYPD8Q6UX82 237 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 FAM9CQ8IZT9 166 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 TMEM156Q8N614 296 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 TMEM178AQ8NBL3 297 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 CDC26Q8NHZ8 85 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 SLC22A8Q8TCC7 542 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 ASB15Q8WXK1 588 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 TUBGCP3Q96CW5 907 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 SGCZQ96LD1 299 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 C5orf34Q96MH7 638 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 TSSK3Q96PN8 268 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 OR10A5Q9H207 317 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 ACBD3Q9H3P7 528 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 ZNF446Q9NWS9 450 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 ATP6V1HQ9UI12 483 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 NTNG1Q9Y2I2 539 aa14.71□□□□□ -0.05
UPF3A-208ENST00000484246 HELZ2Q9BYK8 2649 aaKnown RBP14.71□□□□□ -0.06
UPF3A-208ENST00000484246 SCN2AQ99250 2005 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 A0A087WV62 115 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 WWP2O00308 870 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 PLOD2O00469 737 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 HDAC3O15379 428 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 NME2P1O60361 137 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 BCAS2O75934 225 aaPredicted RBP14.7□□□□□ -0.06
UPF3A-208ENST00000484246 SP1P08047 785 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 PCSK2P16519 638 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 NME2P22392 152 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 RPL3P39023 403 aaKnown RBP14.7□□□□□ -0.06
UPF3A-208ENST00000484246 DUSP8Q13202 625 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 LTB4RQ15722 352 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 ZNF324BQ6AW86 544 aaPredicted RBP14.7□□□□□ -0.06
UPF3A-208ENST00000484246 SPINK14Q6IE38 97 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 SLC25A25Q6KCM7 469 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 FAM111BQ6SJ93 734 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 C16orf47Q6ZP98 133 aaPredicted RBP14.7□□□□□ -0.06
UPF3A-208ENST00000484246 R3HCC1LQ7Z5L2 792 aaKnown RBP14.7□□□□□ -0.06
UPF3A-208ENST00000484246 CCDC116Q8IYX3 515 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 CYP4Z2PQ8N1L4 340 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 CISD2Q8N5K1 135 aaKnown RBP14.7□□□□□ -0.06
UPF3A-208ENST00000484246 FNDC5Q8NAU1 212 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 GOLM1Q8NBJ4 401 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 GALNT11Q8NCW6 608 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 OR9A2Q8NGT5 310 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 C16orf52Q8NHV5 167 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 ADIPOR1Q96A54 375 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 AMDHD1Q96NU7 426 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 SLX1AQ9BQ83 275 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 BRINP2Q9C0B6 783 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 AGPAT4Q9NRZ5 378 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 PNPOQ9NVS9 261 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 ANKRD10Q9NXR5 420 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 NOP53Q9NZM5 478 aaKnown RBP14.7□□□□□ -0.06
UPF3A-208ENST00000484246 PRODH2Q9UF12 536 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 GIMAP2Q9UG22 337 aa14.7□□□□□ -0.06
UPF3A-208ENST00000484246 KLF13Q9Y2Y9 288 aaPredicted RBP14.7□□□□□ -0.06
UPF3A-208ENST00000484246 COPG1Q9Y678 874 aaKnown RBP14.7□□□□□ -0.06
UPF3A-208ENST00000484246 SPENQ96T58 3664 aaKnown RBP14.7□□□□□ -0.06
UPF3A-208ENST00000484246 A8MVJ9 347 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 SCAMP2O15127 329 aaKnown RBP14.69□□□□□ -0.06
UPF3A-208ENST00000484246 ZNF354AO60765 605 aaPredicted RBP14.69□□□□□ -0.06
UPF3A-208ENST00000484246 OR6B1O95007 311 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 RASAL1O95294 804 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 PSMG1O95456 288 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 FBXO45P0C2W1 286 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 GPX3P22352 226 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 HPCAL1P37235 193 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 SOX3P41225 446 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 PPP2R2AP63151 447 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 PSPHP78330 225 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 ZNF791Q3KP31 576 aaPredicted RBP14.69□□□□□ -0.06
UPF3A-208ENST00000484246 FHL5Q5TD97 284 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 IL23RQ5VWK5 629 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 FAM180BQ6P0A1 224 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 FAM180AQ6UWF9 173 aa14.69□□□□□ -0.06
UPF3A-208ENST00000484246 RTL4Q6ZR62 310 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms