RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 LSRQ86X29 649 aaPredicted RBP8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 RBM45Q8IUH3 476 aaKnown RBP8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 OR7G2Q8NG99 324 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 OR4D11Q8NGI4 311 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 FAM174AQ8TBP5 190 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 SGCDQ92629 289 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 TMIGD2Q96BF3 282 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 GIMAP5Q96F15 307 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 ZNF300Q96RE9 604 aaPredicted RBP8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 SERINC2Q96SA4 455 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 MFRPQ9BY79 579 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 QRSL1Q9H0R6 528 aaKnown RBP8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 SEMA6CQ9H3T2 930 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 RAD21L1Q9H4I0 556 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 REEP1Q9H902 201 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 CLK4Q9HAZ1 481 aaKnown RBP8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 EQTNQ9NQ60 294 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 RHCGQ9UBD6 479 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 TRPC4Q9UBN4 977 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 ENTPD4Q9Y227 616 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 ANGPT4Q9Y264 503 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 LYVE1Q9Y5Y7 322 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 SLC22A7Q9Y694 548 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 ZNF292O60281 2723 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 CYR61O00622 381 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 AQP9O43315 295 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 B3GALT2O43825 422 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 CHRM4P08173 479 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 PABPC4LP0CB38 370 aaKnown RBP8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 MYF5P13349 255 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 CD247P20963 164 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 IGFBP5P24593 272 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 GFERP55789 205 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 ISL1P61371 349 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 SIM2Q14190 667 aaPredicted RBP8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 CTU2Q2VPK5 515 aaKnown RBP8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 C6orf132Q5T0Z8 1188 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 SLC36A4Q6YBV0 504 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 C17orf82Q86X59 251 aaPredicted RBP8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 LACC1Q8IV20 430 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 DNASE2BQ8WZ79 361 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 SLC35G5Q96KT7 338 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 GABARAPL1Q9H0R8 117 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 LYARQ9NX58 379 aaKnown RBP8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 IFT80Q9P2H3 777 aaPredicted RBP8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 RABL2AQ9UBK7 228 aaPredicted RBP8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 C3orf18Q9UK00 162 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 DOLKQ9UPQ8 538 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 ZNF780BQ9Y6R6 833 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 R4GN57 208 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 LOC100130705A0A1B0GUX0 176 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 OR2W5A6NFC9 320 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 C5orf58C9J3I9 102 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 LMO7DNF2Z398 122 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 PCDH17O14917 1159 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 VILLO15195 856 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 SLC28A2O43868 658 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 FGF17O60258 216 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 GALR3O60755 368 aaPredicted RBP8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 DPM1O60762 260 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 ZIC2O95409 532 aaPredicted RBP8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 EPPINO95925 133 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 FHP07954 510 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 IL7RP16871 459 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 DDX5P17844 614 aaKnown RBP8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 CDH3P22223 829 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 BUD31P41223 144 aaPredicted RBP8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 XCR1P46094 333 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 RPL5P46777 297 aaKnown RBP8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 CAPZBP47756 277 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 FNTBP49356 437 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 MAN2A2P49641 1150 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 NUBP1P53384 320 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 CDH12P55289 794 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 SHC2P98077 582 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 IL1RL1Q01638 556 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 BNIP3Q12983 259 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 ELOAQ14241 798 aaKnown RBP8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 GANABQ14697 944 aaKnown RBP8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 MEP1AQ16819 746 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 TRMT12Q53H54 448 aaKnown RBP8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 TMEM64Q6YI46 380 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 ABHD13Q7L211 337 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 TSPYL5Q86VY4 417 aaPredicted RBP8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 GKN2Q86XP6 184 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 ARMC8Q8IUR7 673 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 SLC25A45Q8N413 288 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 C19orf47Q8N9M1 422 aaKnown RBP8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 PIK3C3Q8NEB9 887 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 OR4C15Q8NGM1 316 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 OR9A4Q8NGU2 314 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 LZICQ8WZA0 190 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 UBE2FQ969M7 185 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 THAP11Q96EK4 314 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 RDH12Q96NR8 316 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 COL21A1Q96P44 957 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 FEVQ99581 238 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 SLC38A3Q99624 504 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 MRPS26Q9BYN8 205 aaKnown RBP8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 PCED1AQ9H1Q7 454 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms