RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 COPG1Q9Y678 874 aaKnown RBP19.39■□□□□ 0.69
SEC13-217ENST00000482647 C2orf92A0A1B0GVN3 265 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 NEURL1O76050 574 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 LRATO95237 230 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 DDX5P17844 614 aaKnown RBP19.38■□□□□ 0.69
SEC13-217ENST00000482647 S1PR1P21453 382 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 NTSP30990 170 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 PRSS53Q2L4Q9 553 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 ZNF628Q5EBL2 1059 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 ZNF766Q5HY98 468 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 HLA-DQA1Q5Y7H0 255 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 FAM111BQ6SJ93 734 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 R3HCC1LQ7Z5L2 792 aaKnown RBP19.38■□□□□ 0.69
SEC13-217ENST00000482647 GPALPP1Q8IXQ4 340 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 FAM9CQ8IZT9 166 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 ZNF615Q8N8J6 731 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 OR9A2Q8NGT5 310 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 CLHC1Q8NHS4 586 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 ZNF675Q8TD23 568 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 LRRC8CQ8TDW0 803 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 ASB15Q8WXK1 588 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 TMEM125Q96AQ2 219 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 ERP27Q96DN0 273 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 MTERF3Q96E29 417 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 GAL3ST4Q96RP7 486 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 RASL10BQ96S79 203 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 WWTR1Q9GZV5 400 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 MEAF6Q9HAF1 191 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 RYDENQ9NUL5 291 aaKnown RBP19.38■□□□□ 0.69
SEC13-217ENST00000482647 INTS9Q9NV88 658 aaKnown RBP19.38■□□□□ 0.69
SEC13-217ENST00000482647 MAP10Q9P2G4 905 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 BCAP29Q9UHQ4 241 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 ZNF639Q9UID6 485 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 CFL2Q9Y281 166 aa19.38■□□□□ 0.69
SEC13-217ENST00000482647 TRPC5OSA6NMA1 111 aa19.37■□□□□ 0.69
SEC13-217ENST00000482647 HDAC3O15379 428 aa19.37■□□□□ 0.69
SEC13-217ENST00000482647 TBX19O60806 448 aa19.37■□□□□ 0.69
SEC13-217ENST00000482647 BCAS2O75934 225 aaPredicted RBP19.37■□□□□ 0.69
SEC13-217ENST00000482647 SP1P08047 785 aa19.37■□□□□ 0.69
SEC13-217ENST00000482647 PTGER1P34995 402 aa19.37■□□□□ 0.69
SEC13-217ENST00000482647 HPCAL1P37235 193 aa19.37■□□□□ 0.69
SEC13-217ENST00000482647 RPL3P39023 403 aaKnown RBP19.37■□□□□ 0.69
SEC13-217ENST00000482647 NCBP2P52298 156 aaKnown RBP eCLIP19.37■□□□□ 0.69
SEC13-217ENST00000482647 EBPQ15125 230 aaKnown RBP19.37■□□□□ 0.69
SEC13-217ENST00000482647 LTB4RQ15722 352 aa19.37■□□□□ 0.69
SEC13-217ENST00000482647 INAQ16352 499 aa19.37■□□□□ 0.69
SEC13-217ENST00000482647 PIGGQ5H8A4 983 aa19.37■□□□□ 0.69
SEC13-217ENST00000482647 SLC25A25Q6KCM7 469 aa19.37■□□□□ 0.69
SEC13-217ENST00000482647 OPN5Q6U736 354 aa19.37■□□□□ 0.69
SEC13-217ENST00000482647 LRRC34Q8IZ02 419 aa19.37■□□□□ 0.69
SEC13-217ENST00000482647 SLC15A4Q8N697 577 aa19.37■□□□□ 0.69
SEC13-217ENST00000482647 SLC22A8Q8TCC7 542 aa19.37■□□□□ 0.69
SEC13-217ENST00000482647 SNRNP40Q96DI7 357 aaKnown RBP19.37■□□□□ 0.69
SEC13-217ENST00000482647 NOP53Q9NZM5 478 aaKnown RBP19.37■□□□□ 0.69
SEC13-217ENST00000482647 SH3BP4Q9P0V3 963 aa19.37■□□□□ 0.69
SEC13-217ENST00000482647 MARCOQ9UEW3 520 aaPredicted RBP19.37■□□□□ 0.69
SEC13-217ENST00000482647 ERVK-11Q9UQG0 969 aa19.37■□□□□ 0.69
SEC13-217ENST00000482647 SPENQ96T58 3664 aaKnown RBP19.37■□□□□ 0.69
SEC13-217ENST00000482647 A8MVJ9 347 aa19.36■□□□□ 0.69
SEC13-217ENST00000482647 SLC25A12O75746 678 aa19.36■□□□□ 0.69
SEC13-217ENST00000482647 SLITRK5O94991 958 aa19.36■□□□□ 0.69
SEC13-217ENST00000482647 KITP10721 976 aa19.36■□□□□ 0.69
SEC13-217ENST00000482647 PCSK2P16519 638 aa19.36■□□□□ 0.69
SEC13-217ENST00000482647 MRPS35P82673 323 aaKnown RBP19.36■□□□□ 0.69
SEC13-217ENST00000482647 PDE7AQ13946 482 aa19.36■□□□□ 0.69
SEC13-217ENST00000482647 TRMT12Q53H54 448 aaKnown RBP19.36■□□□□ 0.69
SEC13-217ENST00000482647 PRR30Q53SZ7 412 aaPredicted RBP19.36■□□□□ 0.69
SEC13-217ENST00000482647 ANKRD26P1Q6NSI1 321 aa19.36■□□□□ 0.69
SEC13-217ENST00000482647 CYP4Z2PQ8N1L4 340 aa19.36■□□□□ 0.69
SEC13-217ENST00000482647 TMEM178AQ8NBL3 297 aa19.36■□□□□ 0.69
SEC13-217ENST00000482647 C16orf52Q8NHV5 167 aa19.36■□□□□ 0.69
SEC13-217ENST00000482647 TP53INP1Q96A56 240 aa19.36■□□□□ 0.69
SEC13-217ENST00000482647 SCMH1Q96GD3 660 aa19.36■□□□□ 0.69
SEC13-217ENST00000482647 KLHL1Q9NR64 748 aa19.36■□□□□ 0.69
SEC13-217ENST00000482647 AGPAT4Q9NRZ5 378 aa19.36■□□□□ 0.69
SEC13-217ENST00000482647 HPF1Q9NWY4 346 aa19.36■□□□□ 0.69
SEC13-217ENST00000482647 ASIC5Q9NY37 505 aa19.36■□□□□ 0.69
SEC13-217ENST00000482647 PRODH2Q9UF12 536 aa19.36■□□□□ 0.69
SEC13-217ENST00000482647 J3QKU1 62 aa19.35■□□□□ 0.69
SEC13-217ENST00000482647 OR6B1O95007 311 aa19.35■□□□□ 0.69
SEC13-217ENST00000482647 CBX7O95931 251 aa19.35■□□□□ 0.69
SEC13-217ENST00000482647 G6PDP11413 515 aa19.35■□□□□ 0.69
SEC13-217ENST00000482647 PRPS1L1P21108 318 aa19.35■□□□□ 0.69
SEC13-217ENST00000482647 SOX3P41225 446 aa19.35■□□□□ 0.69
SEC13-217ENST00000482647 PTGR1Q14914 329 aa19.35■□□□□ 0.69
SEC13-217ENST00000482647 EXOSC7Q15024 291 aaKnown RBP19.35■□□□□ 0.69
SEC13-217ENST00000482647 MAPKAPK3Q16644 382 aa19.35■□□□□ 0.69
SEC13-217ENST00000482647 IL20RBQ6UXL0 311 aa19.35■□□□□ 0.69
SEC13-217ENST00000482647 ZNF227Q86WZ6 799 aa19.35■□□□□ 0.69
SEC13-217ENST00000482647 WDR75Q8IWA0 830 aaKnown RBP19.35■□□□□ 0.69
SEC13-217ENST00000482647 TAGAPQ8N103 731 aa19.35■□□□□ 0.69
SEC13-217ENST00000482647 C17orf47Q8NEP4 570 aa19.35■□□□□ 0.69
SEC13-217ENST00000482647 OR52R1Q8NGF1 315 aa19.35■□□□□ 0.69
SEC13-217ENST00000482647 PIWIL2Q8TC59 973 aaKnown RBP19.35■□□□□ 0.69
SEC13-217ENST00000482647 KAT2AQ92830 837 aa19.35■□□□□ 0.69
SEC13-217ENST00000482647 AMDHD1Q96NU7 426 aa19.35■□□□□ 0.69
SEC13-217ENST00000482647 PRPF18Q99633 342 aaKnown RBP19.35■□□□□ 0.69
SEC13-217ENST00000482647 TRIM4Q9C037 500 aa19.35■□□□□ 0.69
SEC13-217ENST00000482647 TIMMDC1Q9NPL8 285 aa19.35■□□□□ 0.69
SEC13-217ENST00000482647 ATP6V1HQ9UI12 483 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms