RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 CAPN3P20807 821 aa18.56■□□□□ 0.56
ACTB-210ENST00000477812 SSTR4P31391 388 aa18.56■□□□□ 0.56
ACTB-210ENST00000477812 HSPB3Q12988 150 aa18.56■□□□□ 0.56
ACTB-210ENST00000477812 TIGD2Q4W5G0 525 aa18.56■□□□□ 0.56
ACTB-210ENST00000477812 AGKQ53H12 422 aa18.56■□□□□ 0.56
ACTB-210ENST00000477812 TRMT12Q53H54 448 aaKnown RBP18.56■□□□□ 0.56
ACTB-210ENST00000477812 ANXA8L1Q5VT79 327 aa18.56■□□□□ 0.56
ACTB-210ENST00000477812 KIF2BQ8N4N8 673 aa18.56■□□□□ 0.56
ACTB-210ENST00000477812 ZNF615Q8N8J6 731 aa18.56■□□□□ 0.56
ACTB-210ENST00000477812 PSMF1Q92530 271 aa18.56■□□□□ 0.56
ACTB-210ENST00000477812 KAT2AQ92830 837 aa18.56■□□□□ 0.56
ACTB-210ENST00000477812 ERP27Q96DN0 273 aa18.56■□□□□ 0.56
ACTB-210ENST00000477812 ELP4Q96EB1 424 aa18.56■□□□□ 0.56
ACTB-210ENST00000477812 VMP1Q96GC9 406 aa18.56■□□□□ 0.56
ACTB-210ENST00000477812 CCDC115Q96NT0 180 aa18.56■□□□□ 0.56
ACTB-210ENST00000477812 CNPPD1Q9BV87 410 aa18.56■□□□□ 0.56
ACTB-210ENST00000477812 MYLK2Q9H1R3 596 aa18.56■□□□□ 0.56
ACTB-210ENST00000477812 ATP13A2Q9NQ11 1180 aa18.56■□□□□ 0.56
ACTB-210ENST00000477812 SERHLQ9NQF3 203 aa18.56■□□□□ 0.56
ACTB-210ENST00000477812 MRGBPQ9NV56 204 aa18.56■□□□□ 0.56
ACTB-210ENST00000477812 CCDC167Q9P0B6 97 aa18.56■□□□□ 0.56
ACTB-210ENST00000477812 EPG5Q9HCE0 2579 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 A0A087WV62 115 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 PRSS51A0A1B0GVH4 220 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 DYRK3O43781 588 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 ITGAMP11215 1152 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 ICAM2P13598 275 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 MC3RP41968 323 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 MANFP55145 182 aaKnown RBP18.55■□□□□ 0.56
ACTB-210ENST00000477812 SLC37A1P57057 533 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 HBA1P69905 142 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 KLF10Q13118 480 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 TMEM107Q6UX40 140 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 MSANTD1Q6ZTZ1 278 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 ANKRD46Q86W74 232 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 KBTBD2Q8IY47 623 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 OR2L13Q8N349 312 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 ANKS4BQ8N8V4 417 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 CLEC1AQ8NC01 280 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 OR7G1Q8NGA0 311 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 VPS33AQ96AX1 596 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 ART5Q96L15 291 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 OR52E6Q96RD3 313 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 ANKRA2Q9H9E1 313 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 NTMQ9P121 344 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 ARMCX1Q9P291 453 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 BTNL2Q9UIR0 455 aa18.55■□□□□ 0.56
ACTB-210ENST00000477812 DOCK10Q96BY6 2186 aa18.54■□□□□ 0.56
ACTB-210ENST00000477812 NR5A2O00482 541 aa18.54■□□□□ 0.56
ACTB-210ENST00000477812 SLC22A2O15244 555 aa18.54■□□□□ 0.56
ACTB-210ENST00000477812 CEACAM4O75871 244 aa18.54■□□□□ 0.56
ACTB-210ENST00000477812 DNAJB5O75953 348 aa18.54■□□□□ 0.56
ACTB-210ENST00000477812 ADSLP30566 484 aaPredicted RBP18.54■□□□□ 0.56
ACTB-210ENST00000477812 EXOSC7Q15024 291 aaKnown RBP18.54■□□□□ 0.56
ACTB-210ENST00000477812 TBR1Q16650 682 aa18.54■□□□□ 0.56
ACTB-210ENST00000477812 ST3GAL2Q16842 350 aa18.54■□□□□ 0.56
ACTB-210ENST00000477812 GKAP1Q5VSY0 366 aaPredicted RBP18.54■□□□□ 0.56
ACTB-210ENST00000477812 H3F3CQ6NXT2 135 aa18.54■□□□□ 0.56
ACTB-210ENST00000477812 GK5Q6ZS86 529 aa18.54■□□□□ 0.56
ACTB-210ENST00000477812 MTDHQ86UE4 582 aaKnown RBP18.54■□□□□ 0.56
ACTB-210ENST00000477812 C9orf40Q8IXQ3 194 aa18.54■□□□□ 0.56
ACTB-210ENST00000477812 ARMC10Q8N2F6 343 aa18.54■□□□□ 0.56
ACTB-210ENST00000477812 APOBEC4Q8WW27 367 aaKnown RBP18.54■□□□□ 0.56
ACTB-210ENST00000477812 SPDL1Q96EA4 605 aa18.54■□□□□ 0.56
ACTB-210ENST00000477812 CXorf36Q9H7Y0 433 aa18.54■□□□□ 0.56
ACTB-210ENST00000477812 NEUROD4Q9HD90 331 aa18.54■□□□□ 0.56
ACTB-210ENST00000477812 PTGFRNQ9P2B2 879 aa18.54■□□□□ 0.56
ACTB-210ENST00000477812 C19orf53Q9UNZ5 99 aaPredicted RBP18.54■□□□□ 0.56
ACTB-210ENST00000477812 ITPR1Q14643 2758 aa18.53■□□□□ 0.56
ACTB-210ENST00000477812 TRBV11-1A0A0K0K1C0 115 aa18.53■□□□□ 0.56
ACTB-210ENST00000477812 UPK1AO00322 258 aa18.53■□□□□ 0.56
ACTB-210ENST00000477812 PRKNO60260 465 aaPredicted RBP18.53■□□□□ 0.56
ACTB-210ENST00000477812 CCDC22O60826 627 aa18.53■□□□□ 0.56
ACTB-210ENST00000477812 ITGB2P05107 769 aa18.53■□□□□ 0.56
ACTB-210ENST00000477812 PTPN6P29350 595 aa18.53■□□□□ 0.56
ACTB-210ENST00000477812 CLCN2P51788 898 aa18.53■□□□□ 0.56
ACTB-210ENST00000477812 KCNK10P57789 538 aa18.53■□□□□ 0.56
ACTB-210ENST00000477812 TLR1Q15399 786 aa18.53■□□□□ 0.56
ACTB-210ENST00000477812 VPS26BQ4G0F5 336 aa18.53■□□□□ 0.56
ACTB-210ENST00000477812 C6orf163Q5TEZ5 329 aa18.53■□□□□ 0.56
ACTB-210ENST00000477812 JMJD6Q6NYC1 403 aaPredicted RBP18.53■□□□□ 0.56
ACTB-210ENST00000477812 BORAQ6PGQ7 559 aa18.53■□□□□ 0.56
ACTB-210ENST00000477812 TMEM64Q6YI46 380 aa18.53■□□□□ 0.56
ACTB-210ENST00000477812 GALNT16Q8N428 558 aa18.53■□□□□ 0.56
ACTB-210ENST00000477812 OR8K3Q8NH51 312 aa18.53■□□□□ 0.56
ACTB-210ENST00000477812 GOT1L1Q8NHS2 421 aaPredicted RBP18.53■□□□□ 0.56
ACTB-210ENST00000477812 TSPEARQ8WU66 669 aa18.53■□□□□ 0.56
ACTB-210ENST00000477812 INPP5KQ9BT40 448 aa18.53■□□□□ 0.56
ACTB-210ENST00000477812 OR10A5Q9H207 317 aa18.53■□□□□ 0.56
ACTB-210ENST00000477812 TAS2R9Q9NYW1 312 aa18.53■□□□□ 0.56
ACTB-210ENST00000477812 COPS7AQ9UBW8 275 aa18.53■□□□□ 0.56
ACTB-210ENST00000477812 TMEM200CA6NKL6 621 aa18.52■□□□□ 0.56
ACTB-210ENST00000477812 OR6C76A6NM76 312 aa18.52■□□□□ 0.56
ACTB-210ENST00000477812 CFLARO15519 480 aa18.52■□□□□ 0.56
ACTB-210ENST00000477812 HOXB9P17482 250 aaPredicted RBP18.52■□□□□ 0.56
ACTB-210ENST00000477812 EMDP50402 254 aa18.52■□□□□ 0.56
ACTB-210ENST00000477812 AP2B1P63010 937 aa18.52■□□□□ 0.56
ACTB-210ENST00000477812 RNF4P78317 190 aa18.52■□□□□ 0.56
ACTB-210ENST00000477812 GAB1Q13480 694 aa18.52■□□□□ 0.56
ACTB-210ENST00000477812 EBPQ15125 230 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms