RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 MDGA1Q8NFP4 955 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 UBTD2Q8WUN7 234 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 POF1BQ8WVV4 589 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 C1GALT1C1Q96EU7 318 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 OTUB1Q96FW1 271 aaPredicted RBP10.04□□□□□ -0.8
ABCF1-205ENST00000475993 PTDSS2Q9BVG9 487 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 TSSK6Q9BXA6 273 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 BTBD1Q9H0C5 482 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 RNF39Q9H2S5 420 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 C11orf16Q9NQ32 467 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 TLR8Q9NR97 1041 aaKnown RBP10.04□□□□□ -0.8
ABCF1-205ENST00000475993 TMEM248Q9NWD8 314 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 LAMP5Q9UJQ1 280 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 GSTK1Q9Y2Q3 226 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 SPIN1Q9Y657 262 aaPredicted RBP10.04□□□□□ -0.8
ABCF1-205ENST00000475993 G3V3Q6 166 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 GPR171O14626 319 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 GPR182O15218 404 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 GPR37O15354 613 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 OPN1SWP03999 348 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 ACPPP15309 386 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 RHOQP17081 205 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 PRPS1L1P21108 318 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 TNFAIP1Q13829 316 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 RBMS2Q15434 407 aaKnown RBP10.03□□□□□ -0.8
ABCF1-205ENST00000475993 C9orf152Q5JTZ5 239 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 ZNF770Q6IQ21 691 aaPredicted RBP10.03□□□□□ -0.8
ABCF1-205ENST00000475993 CD200R1LQ6Q8B3 271 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 GLT6D1Q7Z4J2 308 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 WDR53Q7Z5U6 358 aaPredicted RBP10.03□□□□□ -0.8
ABCF1-205ENST00000475993 CLECL1Q8IZS7 167 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 UXS1Q8NBZ7 420 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 CMTM7Q96FZ5 175 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 NARS2Q96I59 477 aaKnown RBP10.03□□□□□ -0.8
ABCF1-205ENST00000475993 CRB3Q9BUF7 120 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 ABCG8Q9H221 673 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 OR51M1Q9H341 326 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 NUDT15Q9NV35 164 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 FAM120CQ9NX05 1096 aaKnown RBP10.03□□□□□ -0.8
ABCF1-205ENST00000475993 HCN3Q9P1Z3 774 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 SCP2D1Q9UJQ7 156 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 HCN2Q9UL51 889 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 PRSS47A8MTI9 375 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 CASKO14936 926 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 YY2O15391 372 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 LANCL1O43813 399 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 PRKRAO75569 313 aaKnown RBP10.03□□□□□ -0.8
ABCF1-205ENST00000475993 CPSF4O95639 269 aaKnown RBP10.03□□□□□ -0.8
ABCF1-205ENST00000475993 IGHV2-70P01814 119 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 ZNF865P0CJ78 1059 aaPredicted RBP10.03□□□□□ -0.8
ABCF1-205ENST00000475993 SULT1A3P0DMM9 295 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 SULT1A4P0DMN0 295 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 XCR1P46094 333 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 LHX1P48742 406 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 ACLYP53396 1101 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 FABP5Q01469 135 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 TPBGQ13641 420 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 CAMK1Q14012 370 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 RGNQ15493 299 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 CPSF6Q16630 551 aaKnown RBP eCLIP10.03□□□□□ -0.8
ABCF1-205ENST00000475993 ATAT1Q5SQI0 421 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 SLC25A25Q6KCM7 469 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 NKAIN4Q8IVV8 208 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 APIPQ96GX9 242 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 RBM18Q96H35 190 aaKnown RBP10.03□□□□□ -0.8
ABCF1-205ENST00000475993 CXorf58Q96LI9 332 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 CMSS1Q9BQ75 279 aaKnown RBP10.03□□□□□ -0.8
ABCF1-205ENST00000475993 HDHD2Q9H0R4 259 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 ABCG5Q9H222 651 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 P2RY12Q9H244 342 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 NMNAT1Q9HAN9 279 aaPredicted RBP10.03□□□□□ -0.8
ABCF1-205ENST00000475993 WWOXQ9NZC7 414 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 COL4A5P29400 1685 aa10.03□□□□□ -0.8
ABCF1-205ENST00000475993 PLXNB2O15031 1838 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 SLC9B1P1A6NJY1 282 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 NPIPB8E9PQR5 432 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 LRRTM2O43300 516 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 CLDN9O95484 217 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 SOD1P00441 154 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 EPB42P16452 691 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 ITPKAP23677 461 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 MC4RP32245 332 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 FEN1P39748 380 aaKnown RBP10.02□□□□□ -0.8
ABCF1-205ENST00000475993 ETV5P41161 510 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 PTGER3P43115 390 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 EPHA4P54764 986 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 DCDC1P59894 354 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 CHAF1BQ13112 559 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 PRAMEF19Q5SWL8 479 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 MARCH8Q5T0T0 291 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 C12orf73Q69YU5 71 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 CEACAM20Q6UY09 585 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 KANSL1Q7Z3B3 1105 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 KLHL36Q8N4N3 616 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 BMPERQ8N8U9 685 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 C11orf65Q8NCR3 313 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 TTC16Q8NEE8 873 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 OR8J2Q8NGG1 315 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 SELENOMQ8WWX9 145 aa10.02□□□□□ -0.8
ABCF1-205ENST00000475993 ERMAPQ96PL5 475 aaPredicted RBP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms