RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 PRKAB2O43741 272 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 LCMT2O60294 686 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 CYTIPO60759 359 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 LRCH4O75427 683 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 TAF5LO75529 589 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 WDR47O94967 919 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 SPDEFO95238 335 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 LY86O95711 162 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 PPBPP02775 128 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 CSF2P04141 144 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 HEXAP06865 529 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 MMP3P08254 477 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 SPARCP09486 303 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 SPP1P10451 314 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 CETPP11597 493 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 PAX1P15863 534 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 ADRA1DP25100 572 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 YWHAQP27348 245 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 TEAD1P28347 426 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 S100A11P31949 105 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 MCM7P33993 719 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 PTGFRP43088 359 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 GABRB2P47870 512 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 TGM4P49221 684 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 RAB5CP51148 216 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 SORDQ00796 357 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 FSTL1Q12841 308 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 PDIA2Q13087 525 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 EIF4EBP2Q13542 120 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 ALCAMQ13740 583 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 MAN2A1Q16706 1144 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 TATDN3Q17R31 274 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 SLC5A12Q1EHB4 618 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 PIGGQ5H8A4 983 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 MIIPQ5JXC2 388 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 C9orf64Q5T6V5 341 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 STRIP1Q5VSL9 837 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 LCN1P1Q5VSP4 162 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 KIAA1161Q6NSJ0 714 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 ANKRD54Q6NXT1 300 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 RPUSD3Q6P087 351 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 ZNF813Q6ZN06 617 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 MBOAT1Q6ZNC8 495 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 G2E3Q7L622 706 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 SLC16A14Q7RTX9 510 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 ZNF551Q7Z340 670 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 SLC46A3Q7Z3Q1 461 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 PEG10Q86TG7 708 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 SYVN1Q86TM6 617 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 ZBTB8OSQ8IWT0 167 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 DNAJC10Q8IXB1 793 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 PGAM4Q8N0Y7 254 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 PRSS35Q8N3Z0 413 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 ZNF557Q8N988 423 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 ACBD4Q8NC06 268 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 TMEM104Q8NE00 496 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 OR2D3Q8NGH3 330 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 OR4C15Q8NGM1 316 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 OR5J2Q8NH18 312 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 TRMT10AQ8TBZ6 339 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 FAR1Q8WVX9 515 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 PIGBQ92521 554 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 LARP4BQ92615 738 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 ASB9Q96DX5 294 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 MED8Q96G25 268 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 MASTLQ96GX5 879 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 TPD52L3Q96J77 140 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 FAM210BQ96KR6 192 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 MRGPRX1Q96LB2 322 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 ZNF300Q96RE9 604 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 CPXM1Q96SM3 734 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 ATP6V0BQ99437 205 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 KLF6Q99612 283 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 PRRX2Q99811 253 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 ADAM2Q99965 735 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 SPXQ9BT56 116 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 ING2Q9H160 280 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 OR10A5Q9H207 317 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 FN3KQ9H479 309 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 HEXA-AS1Q9H8Q6 139 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 ADAP2Q9NPF8 381 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 OBP2BQ9NPH6 170 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 OPTCQ9UBM4 332 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 ANAPC7Q9UJX3 599 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 RNF24Q9Y225 148 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 LYVE1Q9Y5Y7 322 aa5.68□□□□□ -1.5
ECHDC1-215ENST00000475319 NAV1Q8NEY1 1877 aa5.67□□□□□ -1.5
ECHDC1-215ENST00000475319 PCM1Q15154 2024 aa5.67□□□□□ -1.5
ECHDC1-215ENST00000475319 MEGF6O75095 1541 aa5.67□□□□□ -1.5
ECHDC1-215ENST00000475319 A0A087X0M5 115 aa5.67□□□□□ -1.5
ECHDC1-215ENST00000475319 A0A1B0GX30 115 aa5.67□□□□□ -1.5
ECHDC1-215ENST00000475319 A6NIZ1 184 aa5.67□□□□□ -1.5
ECHDC1-215ENST00000475319 TRDCB7Z8K6 153 aa5.67□□□□□ -1.5
ECHDC1-215ENST00000475319 MKRN2OSH3BPM6 223 aa5.67□□□□□ -1.5
ECHDC1-215ENST00000475319 H3BQ06 376 aaPredicted RBP5.67□□□□□ -1.5
ECHDC1-215ENST00000475319 ACKR2O00590 384 aa5.67□□□□□ -1.5
ECHDC1-215ENST00000475319 PDCD5O14737 125 aa5.67□□□□□ -1.5
ECHDC1-215ENST00000475319 MYL12BO14950 172 aa5.67□□□□□ -1.5
ECHDC1-215ENST00000475319 IRAK2O43187 625 aa5.67□□□□□ -1.5
ECHDC1-215ENST00000475319 ZNF821O75541 412 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms