RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 SLC30A8Q8IWU4 369 aa16.9■□□□□ 0.3
VARS2-206ENST00000473916 ST13P4Q8IZP2 240 aaPredicted RBP16.9■□□□□ 0.3
VARS2-206ENST00000473916 QRSL1Q9H0R6 528 aaKnown RBP16.9■□□□□ 0.3
VARS2-206ENST00000473916 ANKHQ9HCJ1 492 aa16.9■□□□□ 0.3
VARS2-206ENST00000473916 PRMT8Q9NR22 394 aaPredicted RBP16.9■□□□□ 0.3
VARS2-206ENST00000473916 PNPLA3Q9NST1 481 aa16.9■□□□□ 0.3
VARS2-206ENST00000473916 MS4A12Q9NXJ0 267 aa16.9■□□□□ 0.3
VARS2-206ENST00000473916 TLCD2A6NGC4 264 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 FOXS1O43638 330 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 LINGO3P0C6S8 592 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 MAN2A2P49641 1150 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 PRR5P85299 388 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 ZC3H12BQ5HYM0 836 aaKnown RBP16.89■□□□□ 0.29
VARS2-206ENST00000473916 MAMSTRQ6ZN01 415 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 USP53Q70EK8 1073 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 ARMC8Q8IUR7 673 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 OR4D11Q8NGI4 311 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 GEMIN6Q8WXD5 167 aaKnown RBP16.89■□□□□ 0.29
VARS2-206ENST00000473916 ZNF300Q96RE9 604 aaPredicted RBP16.89■□□□□ 0.29
VARS2-206ENST00000473916 ELF4Q99607 663 aaPredicted RBP16.89■□□□□ 0.29
VARS2-206ENST00000473916 GABARAPL1Q9H0R8 117 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 DDX18Q9NVP1 670 aaKnown RBP16.89■□□□□ 0.29
VARS2-206ENST00000473916 FAM118AQ9NWS6 357 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 IFT80Q9P2H3 777 aaPredicted RBP16.89■□□□□ 0.29
VARS2-206ENST00000473916 PDP2Q9P2J9 529 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 RHCGQ9UBD6 479 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 CLCA2Q9UQC9 943 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 LYVE1Q9Y5Y7 322 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 IGHV1OR21-1A0A087WYE8 117 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 OR2W5A6NFC9 320 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 CHST10O43529 356 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 SEMA7AO75326 666 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 IFNA14P01570 189 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 FESP07332 822 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 CSF2RBP32927 897 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 SEPHS1P49903 392 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 CDH15P55291 814 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 IL1RL1Q01638 556 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 SPIBQ01892 262 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 GANABQ14697 944 aaKnown RBP16.89■□□□□ 0.29
VARS2-206ENST00000473916 RBM45Q8IUH3 476 aaKnown RBP16.89■□□□□ 0.29
VARS2-206ENST00000473916 LACC1Q8IV20 430 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 ZNF786Q8N393 782 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 SDR16C5Q8N3Y7 309 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 IER2Q9BTL4 223 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 SPRTNQ9H040 489 aaPredicted RBP16.89■□□□□ 0.29
VARS2-206ENST00000473916 C3orf14Q9HBI5 128 aa16.89■□□□□ 0.29
VARS2-206ENST00000473916 BDP1A6H8Y1 2624 aa16.88■□□□□ 0.29
VARS2-206ENST00000473916 H3BNH8 94 aa16.88■□□□□ 0.29
VARS2-206ENST00000473916 B4GAT1O43505 415 aa16.88■□□□□ 0.29
VARS2-206ENST00000473916 CDC123O75794 336 aaPredicted RBP16.88■□□□□ 0.29
VARS2-206ENST00000473916 ZIC2O95409 532 aaPredicted RBP16.88■□□□□ 0.29
VARS2-206ENST00000473916 CYP4B1P13584 511 aa16.88■□□□□ 0.29
VARS2-206ENST00000473916 PORP16435 677 aaPredicted RBP16.88■□□□□ 0.29
VARS2-206ENST00000473916 IGFBP5P24593 272 aa16.88■□□□□ 0.29
VARS2-206ENST00000473916 HOXA6P31267 233 aa16.88■□□□□ 0.29
VARS2-206ENST00000473916 CDH12P55289 794 aa16.88■□□□□ 0.29
VARS2-206ENST00000473916 CSTF1Q05048 431 aaKnown RBP16.88■□□□□ 0.29
VARS2-206ENST00000473916 SIGLEC14Q08ET2 396 aa16.88■□□□□ 0.29
VARS2-206ENST00000473916 ZNF628Q5EBL2 1059 aa16.88■□□□□ 0.29
VARS2-206ENST00000473916 SNAP47Q5SQN1 464 aa16.88■□□□□ 0.29
VARS2-206ENST00000473916 DGAT2L6Q6ZPD8 337 aa16.88■□□□□ 0.29
VARS2-206ENST00000473916 WDR5BQ86VZ2 330 aa16.88■□□□□ 0.29
VARS2-206ENST00000473916 TTC29Q8NA56 475 aaPredicted RBP16.88■□□□□ 0.29
VARS2-206ENST00000473916 MIPOL1Q8TD10 442 aa16.88■□□□□ 0.29
VARS2-206ENST00000473916 ANKRD9Q96BM1 317 aaPredicted RBP16.88■□□□□ 0.29
VARS2-206ENST00000473916 ERVMER34-1Q9H9K5 563 aa16.88■□□□□ 0.29
VARS2-206ENST00000473916 THSD1Q9NS62 852 aa16.88■□□□□ 0.29
VARS2-206ENST00000473916 IRAK4Q9NWZ3 460 aa16.88■□□□□ 0.29
VARS2-206ENST00000473916 TMEM184BQ9Y519 407 aaPredicted RBP16.88■□□□□ 0.29
VARS2-206ENST00000473916 NCOR1O75376 2440 aa16.88■□□□□ 0.29
VARS2-206ENST00000473916 H0YAE9 185 aa16.87■□□□□ 0.29
VARS2-206ENST00000473916 H6PDO95479 791 aa16.87■□□□□ 0.29
VARS2-206ENST00000473916 CT62P0C5K7 136 aa16.87■□□□□ 0.29
VARS2-206ENST00000473916 XCR1P46094 333 aa16.87■□□□□ 0.29
VARS2-206ENST00000473916 RAB38P57729 211 aa16.87■□□□□ 0.29
VARS2-206ENST00000473916 ERV3-1Q14264 604 aa16.87■□□□□ 0.29
VARS2-206ENST00000473916 GPAT3Q53EU6 434 aa16.87■□□□□ 0.29
VARS2-206ENST00000473916 BHLHB9Q6PI77 547 aa16.87■□□□□ 0.29
VARS2-206ENST00000473916 LGI4Q8N135 537 aa16.87■□□□□ 0.29
VARS2-206ENST00000473916 SLC16A11Q8NCK7 471 aa16.87■□□□□ 0.29
VARS2-206ENST00000473916 VANGL1Q8TAA9 524 aaPredicted RBP16.87■□□□□ 0.29
VARS2-206ENST00000473916 MOAP1Q96BY2 351 aa16.87■□□□□ 0.29
VARS2-206ENST00000473916 RMND5BQ96G75 393 aaPredicted RBP16.87■□□□□ 0.29
VARS2-206ENST00000473916 AHCYL2Q96HN2 611 aaKnown RBP16.87■□□□□ 0.29
VARS2-206ENST00000473916 EXD2Q9NVH0 621 aa16.87■□□□□ 0.29
VARS2-206ENST00000473916 SEC14L3Q9UDX4 400 aa16.87■□□□□ 0.29
VARS2-206ENST00000473916 GPC6Q9Y625 555 aaPredicted RBP16.87■□□□□ 0.29
VARS2-206ENST00000473916 ADAMTS20P59510 1910 aa16.87■□□□□ 0.29
VARS2-206ENST00000473916 CCDC163A0A0D9SF12 145 aa16.87■□□□□ 0.29
VARS2-206ENST00000473916 TGFBR3LH3BV60 316 aa16.87■□□□□ 0.29
VARS2-206ENST00000473916 FFAR1O14842 300 aa16.87■□□□□ 0.29
VARS2-206ENST00000473916 NUDT21O43809 227 aaKnown RBP16.87■□□□□ 0.29
VARS2-206ENST00000473916 ZBTB11O95625 1053 aaPredicted RBP16.87■□□□□ 0.29
VARS2-206ENST00000473916 GPR75O95800 540 aa16.87■□□□□ 0.29
VARS2-206ENST00000473916 EPPINO95925 133 aa16.87■□□□□ 0.29
VARS2-206ENST00000473916 EPHA2P29317 976 aa16.87■□□□□ 0.29
VARS2-206ENST00000473916 EPHA4P54764 986 aa16.87■□□□□ 0.29
VARS2-206ENST00000473916 APOFQ13790 326 aa16.87■□□□□ 0.29
VARS2-206ENST00000473916 EXOC3L2Q2M3D2 409 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms