RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 B4DXG7 233 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 PLPP1O14494 284 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 CLGNO14967 610 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 PHGDHO43175 533 aaKnown RBP8.48□□□□□ -1.05
VCL-204ENST00000472585 PHF1O43189 567 aaPredicted RBP8.48□□□□□ -1.05
VCL-204ENST00000472585 TMPRSS11DO60235 418 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 EEDO75530 441 aaKnown RBP8.48□□□□□ -1.05
VCL-204ENST00000472585 STK16O75716 305 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 CD1DP15813 335 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 ALOX15P16050 662 aaPredicted RBP8.48□□□□□ -1.05
VCL-204ENST00000472585 S1PR1P21453 382 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 LOXP28300 417 aaPredicted RBP8.48□□□□□ -1.05
VCL-204ENST00000472585 PTPN6P29350 595 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 RCN2Q14257 317 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 FRG1Q14331 258 aaKnown RBP8.48□□□□□ -1.05
VCL-204ENST00000472585 TBCCQ15814 346 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 SPRED3Q2MJR0 410 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 AP5B1Q2VPB7 878 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 DEPDC1Q5TB30 811 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 KHDRBS2Q5VWX1 349 aaKnown RBP8.48□□□□□ -1.05
VCL-204ENST00000472585 MRM1Q6IN84 353 aaKnown RBP8.48□□□□□ -1.05
VCL-204ENST00000472585 HEPHL1Q6MZM0 1159 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 ADAMTSL2Q86TH1 951 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 GPSM1Q86YR5 675 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 ST13P4Q8IZP2 240 aaPredicted RBP8.48□□□□□ -1.05
VCL-204ENST00000472585 ZNF615Q8N8J6 731 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 SNX31Q8N9S9 440 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 ZPLD1Q8TCW7 415 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 ABTB1Q969K4 478 aaPredicted RBP8.48□□□□□ -1.05
VCL-204ENST00000472585 ADIPOR1Q96A54 375 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 PBKQ96KB5 322 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 WFIKKN1Q96NZ8 548 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 NAT9Q9BTE0 207 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 CAPS2Q9BXY5 557 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 GSX2Q9BZM3 304 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 DERL2Q9GZP9 239 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 TEX10Q9NXF1 929 aaPredicted RBP8.48□□□□□ -1.05
VCL-204ENST00000472585 C6orf203Q9P0P8 240 aaPredicted RBP8.48□□□□□ -1.05
VCL-204ENST00000472585 DTX4Q9Y2E6 619 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 ROS1P08922 2347 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 IQANK1A0A1B0GTG1 560 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 C2orf92A0A1B0GVN3 265 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 SYNDIG1LA6NDD5 238 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 A8MXE2 369 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 GNB5O14775 395 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 PGRMC2O15173 223 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 CCNT2O60583 730 aaKnown RBP8.47□□□□□ -1.05
VCL-204ENST00000472585 TNFSF13O75888 250 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 GPR75O95800 540 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 ABCB1P08183 1280 aaPredicted RBP8.47□□□□□ -1.05
VCL-204ENST00000472585 CCDC166P0CW27 439 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 TMIGD3P0DMS9 266 aaPredicted RBP8.47□□□□□ -1.05
VCL-204ENST00000472585 NID1P14543 1247 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 BSGP35613 385 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 PTH2RP49190 550 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 FNTAP49354 379 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 STARP49675 285 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 SMCPP49901 116 aaPredicted RBP8.47□□□□□ -1.05
VCL-204ENST00000472585 TNFRSF17Q02223 184 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 IRF8Q02556 426 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 KRTAP1-1Q07627 177 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 PCDH1Q08174 1060 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 FAM27E3Q08E93 113 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 MGAT5Q09328 741 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 TBL3Q12788 808 aaKnown RBP8.47□□□□□ -1.05
VCL-204ENST00000472585 DLG1Q12959 904 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 CAPRIN1Q14444 709 aaKnown RBP8.47□□□□□ -1.05
VCL-204ENST00000472585 PDK4Q16654 411 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 TMEM35AQ53FP2 167 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 TIGD3Q6B0B8 471 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 SULT1C3Q6IMI6 304 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 RNF111Q6ZNA4 994 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 C20orf204Q6ZNR8 217 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 FRA10AC1Q70Z53 315 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 GPR180Q86V85 440 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 HIPK1Q86Z02 1210 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 PRR22Q8IZ63 422 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 WDSUB1Q8N9V3 476 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 FAM83FQ8NEG4 500 aaPredicted RBP8.47□□□□□ -1.05
VCL-204ENST00000472585 HUS1BQ8NHY5 278 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 ACTRT1Q8TDG2 376 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 TANKQ92844 425 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 RIT1Q92963 219 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 INTS12Q96CB8 462 aaKnown RBP8.47□□□□□ -1.05
VCL-204ENST00000472585 CTHRC1Q96CG8 243 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 VPS39Q96JC1 886 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 MARK4Q96L34 752 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 ZNF597Q96LX8 424 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 CDK15Q96Q40 435 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 NODALQ96S42 347 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 EFCAB11Q9BUY7 163 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 CD244Q9BZW8 370 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 PHACTR1Q9C0D0 580 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 ROGDIQ9GZN7 287 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 DDX47Q9H0S4 455 aaKnown RBP8.47□□□□□ -1.05
VCL-204ENST00000472585 CXorf21Q9HAI6 301 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 ZNF226Q9NYT6 803 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 WWOXQ9NZC7 414 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 FETUBQ9UGM5 382 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms