RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 PTGR1Q14914 329 aa18.31■□□□□ 0.52
HDAC7-220ENST00000471235 OR1C1Q15619 314 aa18.31■□□□□ 0.52
HDAC7-220ENST00000471235 SMU1Q2TAY7 513 aa18.31■□□□□ 0.52
HDAC7-220ENST00000471235 ZNF385BQ569K4 471 aa18.31■□□□□ 0.52
HDAC7-220ENST00000471235 SLC29A4Q7RTT9 530 aa18.31■□□□□ 0.52
HDAC7-220ENST00000471235 OR7G1Q8NGA0 311 aa18.31■□□□□ 0.52
HDAC7-220ENST00000471235 OR5L2Q8NGL0 311 aa18.31■□□□□ 0.52
HDAC7-220ENST00000471235 BBS4Q96RK4 519 aa18.31■□□□□ 0.52
HDAC7-220ENST00000471235 GAL3ST4Q96RP7 486 aa18.31■□□□□ 0.52
HDAC7-220ENST00000471235 RASL10BQ96S79 203 aa18.31■□□□□ 0.52
HDAC7-220ENST00000471235 WWTR1Q9GZV5 400 aa18.31■□□□□ 0.52
HDAC7-220ENST00000471235 OR10A5Q9H207 317 aa18.31■□□□□ 0.52
HDAC7-220ENST00000471235 YARS2Q9Y2Z4 477 aaKnown RBP18.31■□□□□ 0.52
HDAC7-220ENST00000471235 CDK2AP1O14519 115 aa18.3■□□□□ 0.52
HDAC7-220ENST00000471235 HDAC3O15379 428 aa18.3■□□□□ 0.52
HDAC7-220ENST00000471235 PRAMEF2O60811 474 aa18.3■□□□□ 0.52
HDAC7-220ENST00000471235 CBX7O95931 251 aa18.3■□□□□ 0.52
HDAC7-220ENST00000471235 HPCAL1P37235 193 aa18.3■□□□□ 0.52
HDAC7-220ENST00000471235 HLCSP50747 726 aa18.3■□□□□ 0.52
HDAC7-220ENST00000471235 SSR4P51571 173 aa18.3■□□□□ 0.52
HDAC7-220ENST00000471235 MLLT10P55197 1068 aa18.3■□□□□ 0.52
HDAC7-220ENST00000471235 TLE1Q04724 770 aa18.3■□□□□ 0.52
HDAC7-220ENST00000471235 EXOSC7Q15024 291 aaKnown RBP18.3■□□□□ 0.52
HDAC7-220ENST00000471235 MPEG1Q2M385 716 aa18.3■□□□□ 0.52
HDAC7-220ENST00000471235 ZNF605Q86T29 641 aa18.3■□□□□ 0.52
HDAC7-220ENST00000471235 ZNF227Q86WZ6 799 aa18.3■□□□□ 0.52
HDAC7-220ENST00000471235 WDR75Q8IWA0 830 aaKnown RBP18.3■□□□□ 0.52
HDAC7-220ENST00000471235 SIMC1Q8NDZ2 872 aa18.3■□□□□ 0.52
HDAC7-220ENST00000471235 KAT2AQ92830 837 aa18.3■□□□□ 0.52
HDAC7-220ENST00000471235 PPCDCQ96CD2 204 aa18.3■□□□□ 0.52
HDAC7-220ENST00000471235 C7orf26Q96N11 449 aa18.3■□□□□ 0.52
HDAC7-220ENST00000471235 TRIM4Q9C037 500 aa18.3■□□□□ 0.52
HDAC7-220ENST00000471235 TRIM45Q9H8W5 580 aaPredicted RBP18.3■□□□□ 0.52
HDAC7-220ENST00000471235 NOP53Q9NZM5 478 aaKnown RBP18.3■□□□□ 0.52
HDAC7-220ENST00000471235 LRFN1Q9P244 771 aa18.3■□□□□ 0.52
HDAC7-220ENST00000471235 EIF3LQ9Y262 564 aaKnown RBP18.3■□□□□ 0.52
HDAC7-220ENST00000471235 TTLL8A6PVC2 850 aa18.29■□□□□ 0.52
HDAC7-220ENST00000471235 SLCO1B7G3V0H7 640 aa18.29■□□□□ 0.52
HDAC7-220ENST00000471235 SCAMP2O15127 329 aaKnown RBP18.29■□□□□ 0.52
HDAC7-220ENST00000471235 PDPK1O15530 556 aa18.29■□□□□ 0.52
HDAC7-220ENST00000471235 ZNF354AO60765 605 aaPredicted RBP18.29■□□□□ 0.52
HDAC7-220ENST00000471235 VPS4BO75351 444 aa18.29■□□□□ 0.52
HDAC7-220ENST00000471235 NEURL1O76050 574 aa18.29■□□□□ 0.52
HDAC7-220ENST00000471235 NADKO95544 446 aaPredicted RBP18.29■□□□□ 0.52
HDAC7-220ENST00000471235 G6PDP11413 515 aa18.29■□□□□ 0.52
HDAC7-220ENST00000471235 PLA2G2AP14555 144 aa18.29■□□□□ 0.52
HDAC7-220ENST00000471235 CYB561P49447 251 aa18.29■□□□□ 0.52
HDAC7-220ENST00000471235 NCBP2P52298 156 aaKnown RBP eCLIP18.29■□□□□ 0.52
HDAC7-220ENST00000471235 TRMT12Q53H54 448 aaKnown RBP18.29■□□□□ 0.52
HDAC7-220ENST00000471235 MAVSQ7Z434 540 aa18.29■□□□□ 0.52
HDAC7-220ENST00000471235 LRRC34Q8IZ02 419 aa18.29■□□□□ 0.52
HDAC7-220ENST00000471235 TMEM156Q8N614 296 aa18.29■□□□□ 0.52
HDAC7-220ENST00000471235 ZNF441Q8N8Z8 693 aa18.29■□□□□ 0.52
HDAC7-220ENST00000471235 PIWIL2Q8TC59 973 aaKnown RBP18.29■□□□□ 0.52
HDAC7-220ENST00000471235 CKAP2Q8WWK9 683 aa18.29■□□□□ 0.52
HDAC7-220ENST00000471235 CIDECQ96AQ7 238 aaPredicted RBP18.29■□□□□ 0.52
HDAC7-220ENST00000471235 MTERF3Q96E29 417 aa18.29■□□□□ 0.52
HDAC7-220ENST00000471235 AMDHD1Q96NU7 426 aa18.29■□□□□ 0.52
HDAC7-220ENST00000471235 HES7Q9BYE0 225 aa18.29■□□□□ 0.52
HDAC7-220ENST00000471235 GLIPR2Q9H4G4 154 aa18.29■□□□□ 0.52
HDAC7-220ENST00000471235 SLCO1B3Q9NPD5 702 aa18.29■□□□□ 0.52
HDAC7-220ENST00000471235 ATP6V1HQ9UI12 483 aa18.29■□□□□ 0.52
HDAC7-220ENST00000471235 DTX4Q9Y2E6 619 aa18.29■□□□□ 0.52
HDAC7-220ENST00000471235 TRPC5OSA6NMA1 111 aa18.28■□□□□ 0.52
HDAC7-220ENST00000471235 OR6B1O95007 311 aa18.28■□□□□ 0.52
HDAC7-220ENST00000471235 LBPP18428 481 aa18.28■□□□□ 0.52
HDAC7-220ENST00000471235 GPX3P22352 226 aa18.28■□□□□ 0.52
HDAC7-220ENST00000471235 MPIP34949 423 aa18.28■□□□□ 0.52
HDAC7-220ENST00000471235 SOX3P41225 446 aa18.28■□□□□ 0.52
HDAC7-220ENST00000471235 INPP5JQ15735 1006 aaPredicted RBP18.28■□□□□ 0.52
HDAC7-220ENST00000471235 ZNF766Q5HY98 468 aa18.28■□□□□ 0.52
HDAC7-220ENST00000471235 FHL5Q5TD97 284 aa18.28■□□□□ 0.52
HDAC7-220ENST00000471235 SPINK14Q6IE38 97 aa18.28■□□□□ 0.52
HDAC7-220ENST00000471235 OGFOD2Q6N063 350 aa18.28■□□□□ 0.52
HDAC7-220ENST00000471235 RPUSD3Q6P087 351 aaKnown RBP18.28■□□□□ 0.52
HDAC7-220ENST00000471235 LARP4Q71RC2 724 aaKnown RBP eCLIP18.28■□□□□ 0.52
HDAC7-220ENST00000471235 CYP4Z2PQ8N1L4 340 aa18.28■□□□□ 0.52
HDAC7-220ENST00000471235 OR7G2Q8NG99 324 aa18.28■□□□□ 0.52
HDAC7-220ENST00000471235 OR52R1Q8NGF1 315 aa18.28■□□□□ 0.52
HDAC7-220ENST00000471235 C16orf52Q8NHV5 167 aa18.28■□□□□ 0.52
HDAC7-220ENST00000471235 ASB15Q8WXK1 588 aa18.28■□□□□ 0.52
HDAC7-220ENST00000471235 SCMH1Q96GD3 660 aa18.28■□□□□ 0.52
HDAC7-220ENST00000471235 ANKRA2Q9H9E1 313 aa18.28■□□□□ 0.52
HDAC7-220ENST00000471235 BCAP29Q9UHQ4 241 aa18.28■□□□□ 0.52
HDAC7-220ENST00000471235 NTNG1Q9Y2I2 539 aa18.28■□□□□ 0.52
HDAC7-220ENST00000471235 GOLGA8QA0A0J9YX86 632 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 C2orf92A0A1B0GVN3 265 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 GOLGA8OA6NCC3 632 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 GOLGA8NF8WBI6 632 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 ZNF195O14628 629 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 SLC25A12O75746 678 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 EPHA3P29320 983 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 RPL3P39023 403 aaKnown RBP18.27■□□□□ 0.52
HDAC7-220ENST00000471235 FRKP42685 505 aaPredicted RBP18.27■□□□□ 0.52
HDAC7-220ENST00000471235 DIO3P55073 304 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 INAQ16352 499 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 PIGGQ5H8A4 983 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 R3HCC1LQ7Z5L2 792 aaKnown RBP18.27■□□□□ 0.52
HDAC7-220ENST00000471235 GPALPP1Q8IXQ4 340 aa18.27■□□□□ 0.52
HDAC7-220ENST00000471235 CISD2Q8N5K1 135 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms