RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 DNAJC22Q8N4W6 341 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 METTL27Q8N6F8 245 aaPredicted RBP3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 C1orf52Q8N6N3 182 aaKnown RBP3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 CSNK1A1LQ8N752 337 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 AMER3Q8N944 861 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 TRPV3Q8NET8 790 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 OR4K1Q8NGD4 311 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 CLHC1Q8NHS4 586 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 ZCCHC10Q8TBK6 192 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 WDR20Q8TBZ3 569 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 ACTRT2Q8TDY3 377 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 SLC25A43Q8WUT9 341 aaPredicted RBP3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 NAT6Q93015 286 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 RERGQ96A58 199 aaPredicted RBP3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 WDR34Q96EX3 536 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 CMTM7Q96FZ5 175 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 SLC45A3Q96JT2 553 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 PPP3R2Q96LZ3 170 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 SERPINI1Q99574 410 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 SIKE1Q9BRV8 207 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 CENPKQ9BS16 269 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 CCDC28BQ9BUN5 200 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 MRPL1Q9BYD6 325 aaKnown RBP3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 ACPTQ9BZG2 426 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 SLC7A5P2Q9GIP4 190 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 MYLK2Q9H1R3 596 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 RHBGQ9H310 441 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 EHD1Q9H4M9 534 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 NT5DC2Q9H857 520 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 GPR35Q9HC97 309 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 FAM60AQ9NP50 221 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 PDE7BQ9NP56 450 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 SLAMF7Q9NQ25 335 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 NMRK1Q9NWW6 199 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 C1orf109Q9NX04 203 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 AHSPQ9NZD4 102 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 ARMCX1Q9P291 453 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 VPS29Q9UBQ0 182 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 HAO1Q9UJM8 370 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 FBXW2Q9UKT8 454 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 POMT2Q9UKY4 750 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 SLC45A2Q9UMX9 530 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 PCDHGB2Q9Y5G2 931 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 TTC28Q96AY4 2481 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 PI4KAP42356 2102 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 BPTFQ12830 3046 aa3.86□□□□□ -1.79
TMEM39A-204ENST00000468545 PCM1Q15154 2024 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 IGHV5-10-1A0A0J9YXX1 117 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 SPAARA0A1B0GVQ0 90 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 GNG14A0A1W2PPG7 69 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 A0A1W2PPL8 197 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 OR2A25A4D2G3 310 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 LRIT2A6NDA9 550 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 TLCD2A6NGC4 264 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 ZNF860A6NHJ4 632 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 PRSS29PA6NIE9 313 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 CCT8L1PA6NM43 557 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 MARCH11A6NNE9 402 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 EFCAB7A8K855 629 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 ZNF785A8K8V0 405 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 TMEM150CB9EJG8 249 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 SGK494L7N484 410 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 FOXE1O00358 373 aaPredicted RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 EBAG9O00559 213 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 LSM1O15116 133 aaKnown RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 P2RX6O15547 441 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 ERI3O43414 337 aaKnown RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 RRP9O43818 475 aaKnown RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 PCDH7O60245 1069 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 LRP3O75074 770 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 DNAJB6O75190 326 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 EEDO75530 441 aaKnown RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 DCTN3O75935 186 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 RSL1D1O76021 490 aaKnown RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 NCR1O76036 304 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 ZBTB11O95625 1053 aaPredicted RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 ANXA4P09525 319 aaPredicted RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 ALDOCP09972 364 aaKnown RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 SLC35G6P0C7Q6 338 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 G6PDP11413 515 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 FOLR1P15328 257 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 CD1EP15812 388 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 RHCEP18577 417 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 TGM1P22735 817 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 ACP1P24666 158 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 PIK3R1P27986 724 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 HNRNPH1P31943 449 aaKnown RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 CSTF2P33240 577 aaKnown RBP eCLIP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 AHRP35869 848 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 PIK3CBP42338 1070 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 SSR2P43308 183 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 CPA2P48052 419 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 ALDH9A1P49189 494 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 MAPK10P53779 464 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 PTTG1IPP53801 180 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 INHBCP55103 352 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 SOX8P57073 446 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 STXBP1P61764 594 aaKnown RBP3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 UFM1P61960 85 aa3.85□□□□□ -1.79
TMEM39A-204ENST00000468545 OLR1P78380 273 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms