RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 OR6B1O95007 311 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 AGFG2O95081 481 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 SP1P08047 785 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 ANXA4P09525 319 aaPredicted RBP9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 UROSP10746 265 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 CPMP14384 443 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 MEOX1P50221 254 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 HLCSP50747 726 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 KCNK10P57789 538 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 NAA20P61599 178 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 RPL38P63173 70 aaKnown RBP9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 DUSP2Q05923 314 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 LTB4RQ15722 352 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 NNATQ16517 81 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 GALNTL6Q49A17 601 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 SH2D4BQ5SQS7 431 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 FHL5Q5TD97 284 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 SLC25A25Q6KCM7 469 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 RPUSD3Q6P087 351 aaKnown RBP9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 SLC48A1Q6P1K1 146 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 FAM111BQ6SJ93 734 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 SLC29A4Q7RTT9 530 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 GALNT12Q8IXK2 581 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 DDIASQ8IXT1 998 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 LGI4Q8N135 537 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 ARHGAP24Q8N264 748 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 CPSF7Q8N684 471 aaKnown RBP9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 HORMAD2Q8N7B1 307 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 ADCY4Q8NFM4 1077 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 C16orf78Q8WTQ4 265 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 GFM2Q969S9 779 aaKnown RBP9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 SENP5Q96HI0 755 aaPredicted RBP9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 LRRC37BQ96QE4 947 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 RASL10BQ96S79 203 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 PAIP2Q9BPZ3 127 aaKnown RBP9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 MYOTQ9UBF9 498 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 BCAP29Q9UHQ4 241 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 UTS2RQ9UKP6 389 aa9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 YARS2Q9Y2Z4 477 aaKnown RBP9.03□□□□□ -0.96
RTFDC1-205ENST00000466260 NBASA2RRP1 2371 aa9.02□□□□□ -0.96
RTFDC1-205ENST00000466260 TMEM200CA6NKL6 621 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 ZNHIT1O43257 154 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 RGS14O43566 566 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 NPHS1O60500 1241 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 ZNF354AO60765 605 aaPredicted RBP9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 SEC22BO75396 215 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 LYPLA1O75608 230 aaPredicted RBP9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 CHEK2O96017 543 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 BPGMP07738 259 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 LINC00032P0C843 101 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 SLC35E2P0CK97 266 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 NQO1P15559 274 aaKnown RBP9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 PORP16435 677 aaPredicted RBP9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 MST1P26927 711 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 GTF2A1P52655 376 aaPredicted RBP9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 MRPS35P82673 323 aaKnown RBP9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 ALDH6A1Q02252 535 aaKnown RBP9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 ZNF763Q0D2J5 394 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 C2orf80Q0P641 193 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 EXOSC7Q15024 291 aaKnown RBP9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 INAQ16352 499 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 SPRED3Q2MJR0 410 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 ARL13AQ5H913 290 aaPredicted RBP9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 HLA-DQA1Q5Y7H0 255 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 GFRALQ6UXV0 394 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 MDGA2Q7Z553 956 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 ZNF227Q86WZ6 799 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 NUDCD3Q8IVD9 361 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 CCDC116Q8IYX3 515 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 PRR22Q8IZ63 422 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 OR5L2Q8NGL0 311 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 OR5M3Q8NGP4 307 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 OR2T11Q8NH01 316 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 CLHC1Q8NHS4 586 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 TWIST2Q8WVJ9 160 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 NR4A3Q92570 626 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 SCMH1Q96GD3 660 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 FBXL20Q96IG2 436 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 PPP1R36Q96LQ0 422 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 ANKRA2Q9H9E1 313 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 CXorf21Q9HAI6 301 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 EML4Q9HC35 981 aaKnown RBP9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 MIEF1Q9NQG6 463 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 GIMAP2Q9UG22 337 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 CES1P1Q9UKY3 287 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 PPIEQ9UNP9 301 aaKnown RBP9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 ENTPD4Q9Y227 616 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 OSGIN2Q9Y236 505 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 ZNF780BQ9Y6R6 833 aa9.02□□□□□ -0.97
RTFDC1-205ENST00000466260 RELNP78509 3460 aa9.01□□□□□ -0.97
RTFDC1-205ENST00000466260 NINQ8N4C6 2090 aa9.01□□□□□ -0.97
RTFDC1-205ENST00000466260 ANKRD65E5RJM6 399 aa9.01□□□□□ -0.97
RTFDC1-205ENST00000466260 NPIPA5E9PKD4 350 aa9.01□□□□□ -0.97
RTFDC1-205ENST00000466260 SLC28A1O00337 649 aa9.01□□□□□ -0.97
RTFDC1-205ENST00000466260 PIP5K1BO14986 540 aa9.01□□□□□ -0.97
RTFDC1-205ENST00000466260 BIRC5O15392 142 aa9.01□□□□□ -0.97
RTFDC1-205ENST00000466260 NME2P1O60361 137 aa9.01□□□□□ -0.97
RTFDC1-205ENST00000466260 CDC40O60508 579 aaKnown RBP eCLIP9.01□□□□□ -0.97
RTFDC1-205ENST00000466260 SEMA7AO75326 666 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms