RNA–Protein interactions for RNA: ENST00000466159.6

SYNE1-217, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-217ENST00000466159 GSTM5P46439 218 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 XKP51811 444 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 LIMK1P53667 647 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 UGT2B15P54855 530 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 RAB8AP61006 207 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 RPS3AP61247 264 aaKnown RBP8.44□□□□□ -1.06
SYNE1-217ENST00000466159 ERVK-21P61565 698 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 RPS21P63220 83 aaKnown RBP8.44□□□□□ -1.06
SYNE1-217ENST00000466159 FUT5Q11128 374 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 TSTQ16762 297 aaKnown RBP8.44□□□□□ -1.06
SYNE1-217ENST00000466159 ABHD17CQ6PCB6 329 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 PODNL1Q6PEZ8 512 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 PARM1Q6UWI2 310 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 UBE2Q1Q7Z7E8 422 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 IQCF1Q8N6M8 205 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 TTLQ8NG68 377 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 OR2L3Q8NG85 312 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 OR6T1Q8NGN1 323 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 RASSF5Q8WWW0 418 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 FGF14Q92915 247 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 C16orf58Q96GQ5 468 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 DACH2Q96NX9 599 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 FUZQ9BT04 418 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 FAIM2Q9BWQ8 316 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 C1QTNF2Q9BXJ5 285 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 SLC17A9Q9BYT1 436 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 QRSL1Q9H0R6 528 aaKnown RBP8.44□□□□□ -1.06
SYNE1-217ENST00000466159 MMP27Q9H306 513 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 SLC25A19Q9HC21 320 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 EHD3Q9NZN3 535 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 CLEC2DQ9UHP7 191 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 SLC17A4Q9Y2C5 497 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 KCNE3Q9Y6H6 103 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 ARHGAP33O14559 1287 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 SLC31A1O15431 190 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 UGT2B17O75795 530 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 OXSR1O95747 527 aaPredicted RBP8.44□□□□□ -1.06
SYNE1-217ENST00000466159 TP53P04637 393 aaPredicted RBP8.44□□□□□ -1.06
SYNE1-217ENST00000466159 CKMT1AP12532 417 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 ATP5A1P25705 553 aaKnown RBP8.44□□□□□ -1.06
SYNE1-217ENST00000466159 CERS1P27544 350 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 PPP2R1BP30154 601 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 NTSP30990 170 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 PBX2P40425 430 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 PPP5CP53041 499 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 OLR1P78380 273 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 CD300CQ08708 224 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 RPE65Q16518 533 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 TMEM35AQ53FP2 167 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 TOR1AIP1Q5JTV8 583 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 SLX4IPQ5VYV7 408 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 TMEM107Q6UX40 140 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 ZNF367Q7RTV3 350 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 MEX3DQ86XN8 651 aaKnown RBP8.44□□□□□ -1.06
SYNE1-217ENST00000466159 TCEANCQ8N8B7 351 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 MYADMQ96S97 322 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 TRMT61BQ9BVS5 477 aaKnown RBP8.44□□□□□ -1.06
SYNE1-217ENST00000466159 PRR14Q9BWN1 585 aa8.44□□□□□ -1.06
SYNE1-217ENST00000466159 MTIF3Q9H2K0 278 aaKnown RBP8.44□□□□□ -1.06
SYNE1-217ENST00000466159 YBX2Q9Y2T7 364 aaKnown RBP8.44□□□□□ -1.06
SYNE1-217ENST00000466159 PRR19A6NJB7 356 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 K7EQS6 105 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 NARSO43776 548 aaKnown RBP8.43□□□□□ -1.06
SYNE1-217ENST00000466159 RNGTTO60942 597 aaKnown RBP8.43□□□□□ -1.06
SYNE1-217ENST00000466159 AIFM1O95831 613 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 DNTTP04053 509 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 PORP16435 677 aaPredicted RBP8.43□□□□□ -1.06
SYNE1-217ENST00000466159 TEAD1P28347 426 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 CD40LGP29965 261 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 EIF2DP41214 584 aaKnown RBP8.43□□□□□ -1.06
SYNE1-217ENST00000466159 BUD31P41223 144 aaPredicted RBP8.43□□□□□ -1.06
SYNE1-217ENST00000466159 CD97P48960 835 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 SNRPGP62308 76 aaKnown RBP8.43□□□□□ -1.06
SYNE1-217ENST00000466159 LRRC32Q14392 662 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 SSX1Q16384 188 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 ZNF776Q68DI1 518 aaPredicted RBP8.43□□□□□ -1.06
SYNE1-217ENST00000466159 C12orf73Q69YU5 71 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 MRM1Q6IN84 353 aaKnown RBP8.43□□□□□ -1.06
SYNE1-217ENST00000466159 CASP12Q6UXS9 341 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 DGLUCYQ7Z3D6 616 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 ZER1Q7Z7L7 766 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 ATCAYQ86WG3 371 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 KRT73Q86Y46 540 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 CYP4Z2PQ8N1L4 340 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 AMER2Q8N7J2 671 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 C9orf43Q8TAL5 461 aaPredicted RBP8.43□□□□□ -1.06
SYNE1-217ENST00000466159 SLC6A18Q96N87 628 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 FCRL4Q96PJ5 515 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 GPA33Q99795 319 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 APOOQ9BUR5 198 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 FNDC11Q9BVV2 318 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 ANKHQ9HCJ1 492 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 FGF22Q9HCT0 170 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 ABCB10Q9NRK6 738 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 MAN2C1Q9NTJ4 1040 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 QPCTLQ9NXS2 382 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 NDOR1Q9UHB4 597 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 PCDHGA4Q9Y5G9 962 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 KLK4Q9Y5K2 254 aa8.43□□□□□ -1.06
SYNE1-217ENST00000466159 TBC1D3DA0A087WVF3 549 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms