RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 PAQR8Q8TEZ7 354 aa8.91□□□□□ -0.98
USP39-212ENST00000465514 TANKQ92844 425 aa8.91□□□□□ -0.98
USP39-212ENST00000465514 SPACA9Q96E40 222 aaPredicted RBP8.91□□□□□ -0.98
USP39-212ENST00000465514 FBXL20Q96IG2 436 aa8.91□□□□□ -0.98
USP39-212ENST00000465514 DACH2Q96NX9 599 aa8.91□□□□□ -0.98
USP39-212ENST00000465514 AMBRA1Q9C0C7 1298 aa8.91□□□□□ -0.98
USP39-212ENST00000465514 DPH5Q9H2P9 285 aa8.91□□□□□ -0.98
USP39-212ENST00000465514 ZNF703Q9H7S9 590 aaPredicted RBP8.91□□□□□ -0.98
USP39-212ENST00000465514 PROK2Q9HC23 129 aa8.91□□□□□ -0.98
USP39-212ENST00000465514 ZFP64Q9NPA5 681 aa8.91□□□□□ -0.98
USP39-212ENST00000465514 YAE1D1Q9NRH1 226 aa8.91□□□□□ -0.98
USP39-212ENST00000465514 MS4A12Q9NXJ0 267 aa8.91□□□□□ -0.98
USP39-212ENST00000465514 NUDT4Q9NZJ9 180 aa8.91□□□□□ -0.98
USP39-212ENST00000465514 OPTCQ9UBM4 332 aa8.91□□□□□ -0.98
USP39-212ENST00000465514 BOKQ9UMX3 212 aaPredicted RBP8.91□□□□□ -0.98
USP39-212ENST00000465514 EIF3LQ9Y262 564 aaKnown RBP8.91□□□□□ -0.98
USP39-212ENST00000465514 MED12Q93074 2177 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 EXPH5Q8NEV8 1989 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 IQANK1A0A1B0GTG1 560 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 LRRC3CA6NJW4 275 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 WASHC1A8K0Z3 465 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 PLPP1O14494 284 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 EIF3HO15372 352 aaKnown RBP eCLIP8.9□□□□□ -0.98
USP39-212ENST00000465514 TLX2O43763 284 aaPredicted RBP8.9□□□□□ -0.98
USP39-212ENST00000465514 PRKRAO75569 313 aaKnown RBP8.9□□□□□ -0.98
USP39-212ENST00000465514 LRATO95237 230 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 C1QAP02745 245 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 TP53P04637 393 aaPredicted RBP8.9□□□□□ -0.98
USP39-212ENST00000465514 FBXO45P0C2W1 286 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 FAM157CP0CG43 387 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 SLC35E2BP0CK96 405 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 ALOX15P16050 662 aaPredicted RBP8.9□□□□□ -0.98
USP39-212ENST00000465514 EPB42P16452 691 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 FPR1P21462 350 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 SERPINB3P29508 390 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 TLX1P31314 330 aaPredicted RBP8.9□□□□□ -0.98
USP39-212ENST00000465514 CEACAM8P31997 349 aaPredicted RBP8.9□□□□□ -0.98
USP39-212ENST00000465514 SPRP35270 261 aaPredicted RBP8.9□□□□□ -0.98
USP39-212ENST00000465514 PIK3CBP42338 1070 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 TRPC1P48995 793 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 RAP1GDS1P52306 607 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 ZNF136P52737 540 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 HNRNPH2P55795 449 aaKnown RBP8.9□□□□□ -0.98
USP39-212ENST00000465514 GPX6P59796 221 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 HERVK_113P63132 956 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 ERVK-8P63133 956 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 PLIN5Q00G26 463 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 SRSF2Q01130 221 aaKnown RBP8.9□□□□□ -0.98
USP39-212ENST00000465514 TNFRSF17Q02223 184 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 TBL3Q12788 808 aaKnown RBP8.9□□□□□ -0.98
USP39-212ENST00000465514 CALCOCO2Q13137 446 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 ZNF267Q14586 743 aaPredicted RBP8.9□□□□□ -0.98
USP39-212ENST00000465514 ACKR1Q16570 336 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 GRTP1Q5TC63 336 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 GRHL2Q6ISB3 625 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 RAPH1Q70E73 1250 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 CYS1Q717R9 158 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 SLC29A4Q7RTT9 530 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 CMC1Q7Z7K0 106 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 LRRC25Q8N386 305 aaPredicted RBP8.9□□□□□ -0.98
USP39-212ENST00000465514 TEX9Q8N6V9 391 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 OR10G3Q8NGC4 313 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 HUS1BQ8NHY5 278 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 UBTD2Q8WUN7 234 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 ART5Q96L15 291 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 JSRP1Q96MG2 331 aaPredicted RBP8.9□□□□□ -0.98
USP39-212ENST00000465514 GAL3ST4Q96RP7 486 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 ATOH8Q96SQ7 321 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 MTERF1Q99551 399 aaKnown RBP8.9□□□□□ -0.98
USP39-212ENST00000465514 NAPGQ99747 312 aaPredicted RBP8.9□□□□□ -0.98
USP39-212ENST00000465514 ERP44Q9BS26 406 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 ERVK-6Q9BXR3 956 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 WWTR1Q9GZV5 400 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 SLC6A15Q9H2J7 730 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 NMRAL1Q9HBL8 299 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 ACKR4Q9NPB9 350 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.9□□□□□ -0.98
USP39-212ENST00000465514 CNIH4Q9P003 139 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 WHRNQ9P202 907 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 ZNF629Q9UEG4 869 aaPredicted RBP8.9□□□□□ -0.98
USP39-212ENST00000465514 PHF11Q9UIL8 331 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 ERVK-19Q9WJR5 959 aa8.9□□□□□ -0.98
USP39-212ENST00000465514 CHCHD2Q9Y6H1 151 aaPredicted RBP8.9□□□□□ -0.98
USP39-212ENST00000465514 GLOD5A6NK44 160 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 RNF223E7ERA6 249 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 SIAH2O43255 324 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 OR10H2O60403 315 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 KERAO60938 352 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 GPR75O95800 540 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 GSTA2P09210 222 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 LTA4HP09960 611 aaKnown RBP8.89□□□□□ -0.99
USP39-212ENST00000465514 PTX3P26022 381 aaPredicted RBP8.89□□□□□ -0.99
USP39-212ENST00000465514 CRABP2P29373 138 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 AGFG1P52594 562 aaKnown RBP8.89□□□□□ -0.99
USP39-212ENST00000465514 SLC37A1P57057 533 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 RPS13P62277 151 aaKnown RBP8.89□□□□□ -0.99
USP39-212ENST00000465514 SLMAPQ14BN4 828 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 SPRED3Q2MJR0 410 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 KBTBD12Q3ZCT8 623 aa8.89□□□□□ -0.99
USP39-212ENST00000465514 ACSF3Q4G176 576 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms