RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 COPS7AQ9UBW8 275 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 BCAP29Q9UHQ4 241 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 MYO1GB0I1T2 1018 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 OR2J2O76002 312 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 WDPCPO95876 746 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 CBX7O95931 251 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 PRPS2P11908 318 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 ICAM2P13598 275 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 S1PR1P21453 382 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 NTSP30990 170 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 HPCAL1P37235 193 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 ASMTP46597 345 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 SLC37A1P57057 533 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 RNF4P78317 190 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 MAD2L1Q13257 205 aaPredicted RBP11.03□□□□□ -0.64
APTX-213ENST00000465003 LACTB2Q53H82 288 aaPredicted RBP11.03□□□□□ -0.64
APTX-213ENST00000465003 ZNF628Q5EBL2 1059 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 SPANXN4Q5MJ08 99 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 ACER2Q5QJU3 275 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 OGFOD2Q6N063 350 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 PAOXQ6QHF9 649 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 ACAD11Q709F0 780 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 KIRREL3Q8IZU9 778 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 MORN4Q8NDC4 146 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 FBXO30Q8TB52 745 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 SLC39A7Q92504 469 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 LMF1Q96S06 567 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 SMAD5Q99717 465 aaKnown RBP11.03□□□□□ -0.64
APTX-213ENST00000465003 HES7Q9BYE0 225 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 DPY30Q9C005 99 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 SLC25A18Q9H1K4 315 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 OR10A5Q9H207 317 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 STMN3Q9NZ72 180 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.03□□□□□ -0.64
APTX-213ENST00000465003 GPR45Q9Y5Y3 372 aa11.03□□□□□ -0.64
APTX-213ENST00000465003 UBDO15205 165 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 VPS4BO75351 444 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 ITGA10O75578 1167 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 C6orf47O95873 294 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 C1QCP02747 245 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 ALPPP05187 535 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 SOX11P35716 441 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 CLDN8P56748 225 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 PHC1P78364 1004 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 SPRED3Q2MJR0 410 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 FAM174BQ3ZCQ3 159 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 CPTPQ5TA50 214 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 ABHD17BQ5VST6 288 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 ISLR2Q6UXK2 745 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 RNF111Q6ZNA4 994 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 PRR22Q8IZ63 422 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 OR5AK3PQ8NH89 298 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 CEP70Q8NHQ1 597 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 C16orf52Q8NHV5 167 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 ACTRT2Q8TDY3 377 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 RILPQ96NA2 401 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 ZNF317Q96PQ6 595 aaPredicted RBP11.02□□□□□ -0.65
APTX-213ENST00000465003 UBL7Q96S82 380 aaPredicted RBP11.02□□□□□ -0.65
APTX-213ENST00000465003 TMEM120AQ9BXJ8 343 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 EQTNQ9NQ60 294 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 PPIEQ9UNP9 301 aaKnown RBP11.02□□□□□ -0.65
APTX-213ENST00000465003 ERVK-11Q9UQG0 969 aa11.02□□□□□ -0.65
APTX-213ENST00000465003 PCDHGA9Q9Y5G4 932 aaKnown RBP11.02□□□□□ -0.65
APTX-213ENST00000465003 ERICH4A6NGS2 130 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 ATXN7O15265 892 aaPredicted RBP11.01□□□□□ -0.65
APTX-213ENST00000465003 DYRK3O43781 588 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 PRPS1L1P21108 318 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 MPIP34949 423 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 GPC1P35052 558 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 GSTM5P46439 218 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 PRKAG1P54619 331 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 MANFP55145 182 aaKnown RBP11.01□□□□□ -0.65
APTX-213ENST00000465003 CASP9P55211 416 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 SOX8P57073 446 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 ARG2P78540 354 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 FUT7Q11130 342 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 EBPQ15125 230 aaKnown RBP11.01□□□□□ -0.65
APTX-213ENST00000465003 CEBPEQ15744 281 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 SOWAHCQ53LP3 525 aaPredicted RBP11.01□□□□□ -0.65
APTX-213ENST00000465003 CRB2Q5IJ48 1285 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 C6orf163Q5TEZ5 329 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 DESI1Q6ICB0 168 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 SPINK14Q6IE38 97 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 RPS19BP1Q86WX3 136 aaKnown RBP11.01□□□□□ -0.65
APTX-213ENST00000465003 FAM9CQ8IZT9 166 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 SLC5A8Q8N695 610 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 RBMXL3Q8N7X1 1067 aaKnown RBP11.01□□□□□ -0.65
APTX-213ENST00000465003 ZNF615Q8N8J6 731 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 OR5M3Q8NGP4 307 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 CTHRC1Q96CG8 243 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 SIGLEC12Q96PQ1 595 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 ITPAQ9BY32 194 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 ASIC5Q9NY37 505 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 ATP6V1HQ9UI12 483 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 SNX8Q9Y5X2 465 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 FAM208BQ5VWN6 2430 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 NCF2P19878 526 aaPredicted RBP11.01□□□□□ -0.65
APTX-213ENST00000465003 CORO7P57737 925 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 GNGT1P63211 74 aa11.01□□□□□ -0.65
APTX-213ENST00000465003 OC90Q02509 493 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms