RNA–Protein interactions for RNA: ENST00000464572.5

SUPT20H-204, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-204ENST00000464572 PGAM4Q8N0Y7 254 aa11.93□□□□□ -0.5
SUPT20H-204ENST00000464572 VWA5B2Q8N398 1253 aa11.93□□□□□ -0.5
SUPT20H-204ENST00000464572 PNPT1Q8TCS8 783 aaKnown RBP11.93□□□□□ -0.5
SUPT20H-204ENST00000464572 ZNF675Q8TD23 568 aa11.93□□□□□ -0.5
SUPT20H-204ENST00000464572 PTPMT1Q8WUK0 201 aaPredicted RBP11.93□□□□□ -0.5
SUPT20H-204ENST00000464572 C8orf44Q96CB5 159 aa11.93□□□□□ -0.5
SUPT20H-204ENST00000464572 GPATCH1Q9BRR8 931 aaKnown RBP11.93□□□□□ -0.5
SUPT20H-204ENST00000464572 CNPPD1Q9BV87 410 aa11.93□□□□□ -0.5
SUPT20H-204ENST00000464572 GPR87Q9BY21 358 aa11.93□□□□□ -0.5
SUPT20H-204ENST00000464572 TPT1P8Q9HAU6 139 aa11.93□□□□□ -0.5
SUPT20H-204ENST00000464572 ZCCHC3Q9NUD5 404 aaKnown RBP11.93□□□□□ -0.5
SUPT20H-204ENST00000464572 DDX18Q9NVP1 670 aaKnown RBP11.93□□□□□ -0.5
SUPT20H-204ENST00000464572 NDE1Q9NXR1 346 aa11.93□□□□□ -0.5
SUPT20H-204ENST00000464572 HRKO00198 91 aa11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 CLIC1O00299 241 aa11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 UPK1AO00322 258 aa11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 PLOD2O00469 737 aa11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 TERTO14746 1132 aaKnown RBP11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 CHI3L1P36222 383 aaPredicted RBP11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 MAP4K2Q12851 820 aa11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 ELAVL1Q15717 326 aaKnown RBP11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 SFT2D3Q587I9 215 aa11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 RABL3Q5HYI8 236 aa11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 C6orf163Q5TEZ5 329 aa11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 TMEM205Q6UW68 189 aa11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 ZNF771Q7L3S4 317 aaPredicted RBP11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 ZFP90Q8TF47 636 aa11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 CTHRC1Q96CG8 243 aa11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 ZNF578Q96N58 590 aaPredicted RBP11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 THUMPD3Q9BV44 507 aaKnown RBP11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 C3orf14Q9HBI5 128 aa11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 AKAP13Q12802 2813 aa11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 EMC8O43402 210 aa11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 CYC1P08574 325 aa11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 LIPCP11150 499 aa11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 CASP9P55211 416 aa11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 TP53BP2Q13625 1128 aa11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 SELPLGQ14242 412 aa11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 IKZF5Q9H5V7 419 aa11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 CELSR3Q9NYQ7 3312 aa11.92□□□□□ -0.5
SUPT20H-204ENST00000464572 SYNDIG1LA6NDD5 238 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 PLOD3O60568 738 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 NME6O75414 186 aaPredicted RBP11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 GALNSP34059 522 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 SLC7A2P52569 658 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 PRR5P85299 388 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 EXOSC7Q15024 291 aaKnown RBP11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 TBC1D25Q3MII6 688 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 TMEM64Q6YI46 380 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 C6orf120Q7Z4R8 191 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 CPEB2Q7Z5Q1 589 aaKnown RBP11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 OR2L13Q8N349 312 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 KIF2BQ8N4N8 673 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 NUP43Q8NFH3 380 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 CDRT15Q96T59 188 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 PTGFRNQ9P2B2 879 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 C19orf25Q9UFG5 118 aaPredicted RBP11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 IL17BQ9UHF5 180 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 KCND3Q9UK17 655 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 ERVK-19Q9WJR5 959 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 MSRB2Q9Y3D2 182 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 MRPS18BQ9Y676 258 aaKnown RBP11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 DYRK3O43781 588 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 SLITRK5O94991 958 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 S1PR1P21453 382 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 SSTR4P31391 388 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 DNAL1Q4LDG9 190 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 FHL5Q5TD97 284 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 SLC15A3Q8IY34 581 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 DAZLQ92904 295 aaKnown RBP11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 SENP5Q96HI0 755 aaPredicted RBP11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 CPPED1Q9BRF8 314 aaPredicted RBP11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 OR8D2Q9GZM6 311 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 LRMDAQ9H2I8 198 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 GPN2Q9H9Y4 310 aaPredicted RBP11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 SPAG4Q9NPE6 437 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 ADA2Q9NZK5 511 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 PACSIN3Q9UKS6 424 aa11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 C19orf53Q9UNZ5 99 aaPredicted RBP11.91□□□□□ -0.5
SUPT20H-204ENST00000464572 A0A087WV62 115 aa11.9□□□□□ -0.5
SUPT20H-204ENST00000464572 MMP11P24347 488 aa11.9□□□□□ -0.5
SUPT20H-204ENST00000464572 EEF1A2Q05639 463 aaKnown RBP11.9□□□□□ -0.5
SUPT20H-204ENST00000464572 SSPNQ14714 243 aa11.9□□□□□ -0.5
SUPT20H-204ENST00000464572 RNF130Q86XS8 419 aa11.9□□□□□ -0.5
SUPT20H-204ENST00000464572 OR8J3Q8NGG0 315 aa11.9□□□□□ -0.5
SUPT20H-204ENST00000464572 SFXN5Q8TD22 340 aa11.9□□□□□ -0.5
SUPT20H-204ENST00000464572 TMEM125Q96AQ2 219 aa11.9□□□□□ -0.5
SUPT20H-204ENST00000464572 KIAA1143Q96AT1 154 aaPredicted RBP11.9□□□□□ -0.5
SUPT20H-204ENST00000464572 MOAP1Q96BY2 351 aa11.9□□□□□ -0.5
SUPT20H-204ENST00000464572 NEURL3Q96EH8 262 aa11.9□□□□□ -0.5
SUPT20H-204ENST00000464572 EPS8L2Q9H6S3 715 aa11.9□□□□□ -0.5
SUPT20H-204ENST00000464572 EQTNQ9NQ60 294 aa11.9□□□□□ -0.5
SUPT20H-204ENST00000464572 GPATCH2Q9NW75 528 aa11.9□□□□□ -0.5
SUPT20H-204ENST00000464572 CMTM6Q9NX76 183 aa11.9□□□□□ -0.5
SUPT20H-204ENST00000464572 BCAP29Q9UHQ4 241 aa11.9□□□□□ -0.5
SUPT20H-204ENST00000464572 ZNF639Q9UID6 485 aa11.9□□□□□ -0.5
SUPT20H-204ENST00000464572 L3MBTL1Q9Y468 752 aa11.9□□□□□ -0.5
SUPT20H-204ENST00000464572 HS3ST3B1Q9Y662 390 aa11.9□□□□□ -0.5
SUPT20H-204ENST00000464572 C15orf38-AP3S2A0A0A6YYH1 394 aa11.9□□□□□ -0.5
SUPT20H-204ENST00000464572 EVPLLA8MZ36 301 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms