RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 KRTAP16-1A8MUX0 517 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 TGFAP01135 160 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 PPP2R1BP30154 601 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 AKT2P31751 481 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 HSPA1LP34931 641 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 ETV5P41161 510 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 RABIFP47224 123 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 SLC6A8P48029 635 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 GMFBP60983 142 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 SMC1AQ14683 1233 aaKnown RBP2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 CLPPQ16740 277 aaPredicted RBP2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 AGKQ53H12 422 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 ZNF772Q68DY9 489 aaPredicted RBP2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 REP15Q6BDI9 236 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 FAM159AQ6UWV7 190 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 ZNF841Q6ZN19 808 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 GPRIN3Q6ZVF9 776 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 MOB2Q70IA6 237 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 SLC47A2Q86VL8 602 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 RANBP3LQ86VV4 465 aaPredicted RBP2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 LRRC49Q8IUZ0 686 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 C4orf32Q8N8J7 132 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 ZNF485Q8NCK3 441 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 ZNRF1Q8ND25 227 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 C17orf47Q8NEP4 570 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 DQX1Q8TE96 717 aaKnown RBP2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 RASL10AQ92737 203 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 RBM18Q96H35 190 aaKnown RBP2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 DEFB118Q96PH6 123 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 NLNQ9BYT8 704 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 TRIM6Q9C030 488 aaPredicted RBP2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 KRT23Q9C075 422 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 HSD3B7Q9H2F3 369 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 TAS2R16Q9NYV7 291 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 LHX3Q9UBR4 397 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 SEC14L4Q9UDX3 406 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 BCAP29Q9UHQ4 241 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 ZNF346Q9UL40 294 aaKnown RBP2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 PLEKHA6Q9Y2H5 1048 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 FBXO7Q9Y3I1 522 aa2.98□□□□□ -1.93
HMGXB4-205ENST00000464480 FER1L5A0AVI2 2057 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 CCDC180Q9P1Z9 1646 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 UBE4BO95155 1302 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 A0A0A6YYD4 124 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 A0A1B0GU03 582 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 CYB561D2O14569 222 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 TXNL1O43396 289 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 IGHV3-13P01766 116 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 HSD17B1P14061 328 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 GP9P14770 177 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 PRDX6P30041 224 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 SLC7A2P52569 658 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 SLC26A5P58743 744 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 CD300CQ08708 224 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 VWA2Q5GFL6 755 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 TCHHL1Q5QJ38 904 aaPredicted RBP2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 C9orf66Q5T8R8 295 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 WDR25Q64LD2 544 aaPredicted RBP2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 ZNF343Q6P1L6 599 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 EMBQ6PCB8 327 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 DPY19L2P2Q6ZN68 376 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 CCDC71Q8IV32 467 aaPredicted RBP2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 RNF148Q8N7C7 305 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 MAPK1IP1LQ8NDC0 245 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 CNNM3Q8NE01 707 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 OR56B1Q8NGI3 324 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 SAMD8Q96LT4 415 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 CPXM1Q96SM3 734 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 CCDC28BQ9BUN5 200 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 NMNAT2Q9BZQ4 307 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 UBXN6Q9BZV1 441 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 RAB17Q9H0T7 212 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 PNNQ9H307 717 aaKnown RBP2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 RBM28Q9NW13 759 aaKnown RBP2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 PAK5Q9P286 719 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 CLIP2Q9UDT6 1046 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 KLK13Q9UKR3 277 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 ZNF490Q9ULM2 529 aaPredicted RBP2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 NUDCQ9Y266 331 aa2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 MRPL11Q9Y3B7 192 aaKnown RBP2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 MTF2Q9Y483 593 aaPredicted RBP2.97□□□□□ -1.93
HMGXB4-205ENST00000464480 SALL1Q9NSC2 1324 aa2.96□□□□□ -1.93
HMGXB4-205ENST00000464480 SNED1Q8TER0 1413 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 NPIPA5A0A0B4J1W7 369 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 IGHV3-16A0A0C4DH30 117 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 TEX48A0A1B0GUV7 120 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 ACOD1A6NK06 481 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 FOXI3A8MTJ6 420 aaPredicted RBP2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 NPIPA5E9PKD4 350 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 PI15O43692 258 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 MT-ND1P03886 318 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 HCKP08631 526 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 CCDC159P0C7I6 412 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 CCNA2P20248 432 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 UCP1P25874 307 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 PRDX2P32119 198 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 CAMLGP49069 296 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 GSK3BP49841 420 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 BPIFB3P59826 476 aa2.96□□□□□ -1.94
HMGXB4-205ENST00000464480 ITPK1Q13572 414 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms