RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 SHMT2P34897 504 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 RPA3P35244 121 aaPredicted RBP5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 PTGS2P35354 604 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 ETV4P43268 484 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 TSFMP43897 325 aaKnown RBP5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 BDKRB1P46663 353 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 CHN2P52757 468 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 NR1H2P55055 460 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 STX1BP61266 288 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 SSTP61278 116 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 TIAL1Q01085 375 aaKnown RBP eCLIP5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 SLC18A2Q05940 514 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 BTKQ06187 659 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 SCRN3Q0VDG4 424 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 CDC16Q13042 620 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 PRKAA1Q13131 559 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 ATP1A4Q13733 1029 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 BMPR2Q13873 1038 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 TMEM207Q6UWW9 146 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 CLEC9AQ6UXN8 241 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 DCDC5Q6ZRR9 648 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 FAM47EQ6ZV65 393 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 RFPL4BQ6ZWI9 263 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 OVCH1Q7RTY7 1134 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 AMIGO1Q86WK6 493 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 DCUN1D3Q8IWE4 304 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 CCDC28AQ8IWP9 274 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 GALNT16Q8N428 558 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 NKAPQ8N5F7 415 aaKnown RBP5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 BANPQ8N9N5 519 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 OR4E2Q8NGC2 313 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 OR52E1Q8NGJ3 308 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 GRPEL2Q8TAA5 225 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 ENKURQ8TC29 256 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 DCAKDQ8WVC6 231 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 LCN9Q8WX39 176 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 RAD51AP1Q96B01 352 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 NMD3Q96D46 503 aaKnown RBP5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 HSPBAP1Q96EW2 488 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 METTL2AQ96IZ6 378 aaKnown RBP5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 HIST1H2AHQ96KK5 128 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 TGM7Q96PF1 710 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 COQ7Q99807 217 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 HIST1H2AJQ99878 128 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 H2AFJQ9BTM1 129 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 TRIM54Q9BYV2 358 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 TRIM15Q9C019 465 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 CHST8Q9H2A9 424 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 EHD1Q9H4M9 534 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 MARCH7Q9H992 704 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 OLAHQ9NV23 265 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 MRGBPQ9NV56 204 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 C14orf119Q9NWQ9 140 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 GFOD1Q9NXC2 390 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 NDE1Q9NXR1 346 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 TBK1Q9UHD2 729 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 ATP6V1HQ9UI12 483 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 RARRES3Q9UL19 164 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 TCFL5Q9UL49 500 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 PLAGL1Q9UM63 463 aa5.65□□□□□ -1.5
SMARCC1-204ENST00000462198 INTS1Q8N201 2190 aaKnown RBP5.65□□□□□ -1.51
SMARCC1-204ENST00000462198 A0A087X1B8 175 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 A0A096LPK6 155 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 HMX2A2RU54 273 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 GSAPA4D1B5 854 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 WDR91A4D1P6 747 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 OR6C74A6NCV1 312 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 ARHGEF33A8MVX0 844 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 TRIM49D1C9J1S8 452 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 GFYI3L273 518 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 BTN3A1O00481 513 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 PCDH17O14917 1159 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 SLC16A5O15375 505 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 DENRO43583 198 aaKnown RBP5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 SCO2O43819 266 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 PSIP1O75475 530 aaKnown RBP5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 RSL1D1O76021 490 aaKnown RBP5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 SEC24DO94855 1032 aaPredicted RBP5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 SLITRK5O94991 958 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 TNFAIP8O95379 198 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 C1orf105O95561 183 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 CLPTM1O96005 669 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 KLK3P07288 261 aaPredicted RBP5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 RPS17P08708 135 aaKnown RBP5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 SNRPAP09012 282 aaKnown RBP5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 RAB40ALP0C0E4 278 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 ETS2P15036 469 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 FOLR1P15328 257 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 NELFEP18615 380 aaKnown RBP5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 ITGAXP20702 1163 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 CYP2A7P20853 494 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 ADSLP30566 484 aaPredicted RBP5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 KRT20P35900 424 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 HSD17B2P37059 387 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 CA7P43166 264 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 HSPA13P48723 471 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 ETV1P50549 477 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 CDK9P50750 372 aaKnown RBP5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 RAB28P51157 221 aa5.64□□□□□ -1.51
SMARCC1-204ENST00000462198 SMSP52788 366 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms