RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 DENND4CQ5VZ89 1909 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 PRAMEF27A3QJZ7 478 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 HCN1O60741 890 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 NCR1O76036 304 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 HLA-DQB1P01920 261 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 SOD2P04179 222 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 FAM157BP0CG42 384 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 ALDH6A1Q02252 535 aaKnown RBP17.45■□□□□ 0.38
HPS3-204ENST00000462030 SNAPC1Q16533 368 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 SYPL1Q16563 259 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 BTBD16Q32M84 506 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 CEP78Q5JTW2 689 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 TYW3Q6IPR3 259 aaKnown RBP17.45■□□□□ 0.38
HPS3-204ENST00000462030 RFPL4BQ6ZWI9 263 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 LRRC56Q8IYG6 542 aaPredicted RBP17.45■□□□□ 0.38
HPS3-204ENST00000462030 SLC43A3Q8NBI5 491 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 TMEM145Q8NBT3 493 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 OR4M1Q8NGD0 313 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 OR4K5Q8NGD3 323 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 DEDD2Q8WXF8 326 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 RNFT2Q96EX2 444 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 MTG2Q9H4K7 406 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 RFXAPO00287 272 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 LEFTY2O00292 366 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 CASKO14936 926 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 TIMP2P16035 220 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 PPP3R1P63098 170 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 TPBGQ13641 420 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 ARSIQ5FYB1 569 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 SLC9B2Q86UD5 537 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 C11orf74Q86VG3 221 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 IL17FQ96PD4 163 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 SOSTQ9BQB4 213 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 SIRT3Q9NTG7 399 aaPredicted RBP17.44■□□□□ 0.38
HPS3-204ENST00000462030 NUP210Q8TEM1 1887 aaPredicted RBP17.44■□□□□ 0.38
HPS3-204ENST00000462030 PLPP1O14494 284 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 TPD52L2O43399 206 aaKnown RBP17.44■□□□□ 0.38
HPS3-204ENST00000462030 SLC28A2O43868 658 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 PDE9AO76083 593 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 EFNB1P98172 346 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 C19orf57Q0VDD7 668 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 SPDYE7PQ495Y7 208 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 TIGD3Q6B0B8 471 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 TMEM25Q86YD3 366 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 OR5P2Q8WZ92 322 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 MRPS31Q92665 395 aaKnown RBP17.44■□□□□ 0.38
HPS3-204ENST00000462030 UFD1Q92890 307 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 ZC3HAV1LQ96H79 300 aaKnown RBP17.44■□□□□ 0.38
HPS3-204ENST00000462030 TREX2Q9BQ50 279 aaPredicted RBP17.44■□□□□ 0.38
HPS3-204ENST00000462030 EGLN3Q9H6Z9 239 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 MAN2C1Q9NTJ4 1040 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 DKK3Q9UBP4 350 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 LAMA3Q16787 3333 aa17.44■□□□□ 0.38
HPS3-204ENST00000462030 PDPK1O15530 556 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 LYRM1O43325 122 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 TBX6O95947 436 aaPredicted RBP17.43■□□□□ 0.38
HPS3-204ENST00000462030 LALBAP00709 142 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 C1QBP02746 253 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 DDCP20711 480 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 CDK5Q00535 292 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 TNK1Q13470 666 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 RAB33AQ14088 237 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 IL18Q14116 193 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 ZNF658BQ4V348 819 aaPredicted RBP17.43■□□□□ 0.38
HPS3-204ENST00000462030 SLC25A30Q5SVS4 291 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 TECPR1Q7Z6L1 1165 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 KIF18BQ86Y91 864 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 PLCZ1Q86YW0 608 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 TMC8Q8IU68 726 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 OR9A1PQ8NGU1 263 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 TMEM163Q8TC26 289 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 SLC9A6Q92581 669 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 AP2M1Q96CW1 435 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 SCLYQ96I15 445 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 GFM1Q96RP9 751 aaKnown RBP17.43■□□□□ 0.38
HPS3-204ENST00000462030 ACAT2Q9BWD1 397 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 MCUBQ9NWR8 336 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 RNF186Q9NXI6 227 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 ITM2BQ9Y287 266 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 LOC102723532A0A0G2JNH3 316 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 FAM240BA0A1B0GVZ2 78 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 TMEM129A0AVI4 362 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 SHISA3A0PJX4 238 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 MMP20O60882 483 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 ACP2P11117 423 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 DDX5P17844 614 aaKnown RBP17.43■□□□□ 0.38
HPS3-204ENST00000462030 INSL4Q14641 139 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 WSCD2Q2TBF2 565 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 KLHL22Q53GT1 634 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 SMUG1Q53HV7 270 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 TCEAL8Q8IYN2 117 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 DUSP18Q8NEJ0 188 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 OR5D16Q8NGK9 328 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 HCAR2Q8TDS4 363 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 OTUB1Q96FW1 271 aaPredicted RBP17.43■□□□□ 0.38
HPS3-204ENST00000462030 ZNF717Q9BY31 904 aaPredicted RBP17.43■□□□□ 0.38
HPS3-204ENST00000462030 GSTK1Q9Y2Q3 226 aa17.43■□□□□ 0.38
HPS3-204ENST00000462030 A0A1W2PRQ8 180 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 NEDD8-MDP1E9PL57 170 aa17.42■□□□□ 0.38
HPS3-204ENST00000462030 ARHGEF9O43307 516 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms