RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 TMEM109Q9BVC6 243 aa15.73■□□□□ 0.11
TOP3A-202ENST00000461127 UGT2B28Q9BY64 529 aa15.73■□□□□ 0.11
TOP3A-202ENST00000461127 CENPHQ9H3R5 247 aa15.73■□□□□ 0.11
TOP3A-202ENST00000461127 LYRM4Q9HD34 91 aa15.73■□□□□ 0.11
TOP3A-202ENST00000461127 SLC17A6Q9P2U8 582 aa15.73■□□□□ 0.11
TOP3A-202ENST00000461127 PSMC3IPQ9P2W1 217 aaPredicted RBP15.73■□□□□ 0.11
TOP3A-202ENST00000461127 CAPN14A8MX76 684 aa15.72■□□□□ 0.11
TOP3A-202ENST00000461127 CDH16O75309 829 aa15.72■□□□□ 0.11
TOP3A-202ENST00000461127 SASH3O75995 380 aa15.72■□□□□ 0.11
TOP3A-202ENST00000461127 MYZAPP0CAP1 466 aa15.72■□□□□ 0.11
TOP3A-202ENST00000461127 GP5P40197 560 aa15.72■□□□□ 0.11
TOP3A-202ENST00000461127 PTH2RP49190 550 aa15.72■□□□□ 0.11
TOP3A-202ENST00000461127 EEF1A1P68104 462 aaKnown RBP15.72■□□□□ 0.11
TOP3A-202ENST00000461127 ID2Q02363 134 aa15.72■□□□□ 0.11
TOP3A-202ENST00000461127 DMTNQ08495 405 aa15.72■□□□□ 0.11
TOP3A-202ENST00000461127 SLBPQ14493 270 aaKnown RBP eCLIP15.72■□□□□ 0.11
TOP3A-202ENST00000461127 NTRK2Q16620 822 aa15.72■□□□□ 0.11
TOP3A-202ENST00000461127 LGSNQ5TDP6 509 aa15.72■□□□□ 0.11
TOP3A-202ENST00000461127 EEF1A1P5Q5VTE0 462 aa15.72■□□□□ 0.11
TOP3A-202ENST00000461127 ABHD17CQ6PCB6 329 aa15.72■□□□□ 0.11
TOP3A-202ENST00000461127 SCIMPQ6UWF3 145 aa15.72■□□□□ 0.11
TOP3A-202ENST00000461127 PACS2Q86VP3 889 aa15.72■□□□□ 0.11
TOP3A-202ENST00000461127 TAGAPQ8N103 731 aa15.72■□□□□ 0.11
TOP3A-202ENST00000461127 ZNF441Q8N8Z8 693 aa15.72■□□□□ 0.11
TOP3A-202ENST00000461127 C2CD4AQ8NCU7 369 aaPredicted RBP15.72■□□□□ 0.11
TOP3A-202ENST00000461127 SLC44A1Q8WWI5 657 aa15.72■□□□□ 0.11
TOP3A-202ENST00000461127 PIK3IP1Q96FE7 263 aa15.72■□□□□ 0.11
TOP3A-202ENST00000461127 RBM18Q96H35 190 aaKnown RBP15.72■□□□□ 0.11
TOP3A-202ENST00000461127 GAL3ST4Q96RP7 486 aa15.72■□□□□ 0.11
TOP3A-202ENST00000461127 ROGDIQ9GZN7 287 aa15.72■□□□□ 0.11
TOP3A-202ENST00000461127 PITHD1Q9GZP4 211 aaPredicted RBP15.72■□□□□ 0.11
TOP3A-202ENST00000461127 IQANK1A0A1B0GTG1 560 aa15.71■□□□□ 0.11
TOP3A-202ENST00000461127 SNX4O95219 450 aa15.71■□□□□ 0.11
TOP3A-202ENST00000461127 IGKV3-11P04433 115 aa15.71■□□□□ 0.11
TOP3A-202ENST00000461127 CPOXP36551 454 aa15.71■□□□□ 0.11
TOP3A-202ENST00000461127 MC3RP41968 323 aa15.71■□□□□ 0.11
TOP3A-202ENST00000461127 STT3AP46977 705 aa15.71■□□□□ 0.11
TOP3A-202ENST00000461127 KCNC1P48547 511 aa15.71■□□□□ 0.11
TOP3A-202ENST00000461127 SERPINB9P50453 376 aa15.71■□□□□ 0.11
TOP3A-202ENST00000461127 FOXF2Q12947 444 aa15.71■□□□□ 0.11
TOP3A-202ENST00000461127 BIKQ13323 160 aa15.71■□□□□ 0.11
TOP3A-202ENST00000461127 ADPRMQ3LIE5 342 aa15.71■□□□□ 0.11
TOP3A-202ENST00000461127 RBM20Q5T481 1227 aaKnown RBP15.71■□□□□ 0.11
TOP3A-202ENST00000461127 GRTP1Q5TC63 336 aa15.71■□□□□ 0.11
TOP3A-202ENST00000461127 TDRPQ86YL5 185 aa15.71■□□□□ 0.11
TOP3A-202ENST00000461127 RIBC1Q8N443 379 aaPredicted RBP15.71■□□□□ 0.11
TOP3A-202ENST00000461127 PPP1R14CQ8TAE6 165 aa15.71■□□□□ 0.11
TOP3A-202ENST00000461127 FBXL20Q96IG2 436 aa15.71■□□□□ 0.11
TOP3A-202ENST00000461127 KCNC2Q96PR1 638 aa15.71■□□□□ 0.11
TOP3A-202ENST00000461127 EGFL8Q99944 293 aa15.71■□□□□ 0.11
TOP3A-202ENST00000461127 UBQLN3Q9H347 655 aa15.71■□□□□ 0.11
TOP3A-202ENST00000461127 C15orf41Q9Y2V0 281 aa15.71■□□□□ 0.11
TOP3A-202ENST00000461127 PSAT1Q9Y617 370 aa15.71■□□□□ 0.11
TOP3A-202ENST00000461127 A8MXE2 369 aa15.7■□□□□ 0.1
TOP3A-202ENST00000461127 DEFB108AA8MXU0 73 aa15.7■□□□□ 0.1
TOP3A-202ENST00000461127 RGS16O15492 202 aaPredicted RBP15.7■□□□□ 0.1
TOP3A-202ENST00000461127 RCBTB2O95199 551 aa15.7■□□□□ 0.1
TOP3A-202ENST00000461127 ACTL6AO96019 429 aa15.7■□□□□ 0.1
TOP3A-202ENST00000461127 SPRP35270 261 aaPredicted RBP15.7■□□□□ 0.1
TOP3A-202ENST00000461127 HNMTP50135 292 aa15.7■□□□□ 0.1
TOP3A-202ENST00000461127 PLIN5Q00G26 463 aa15.7■□□□□ 0.1
TOP3A-202ENST00000461127 ILF2Q12905 390 aaKnown RBP15.7■□□□□ 0.1
TOP3A-202ENST00000461127 GAB1Q13480 694 aa15.7■□□□□ 0.1
TOP3A-202ENST00000461127 RPS6KA2Q15349 733 aa15.7■□□□□ 0.1
TOP3A-202ENST00000461127 HEPHL1Q6MZM0 1159 aa15.7■□□□□ 0.1
TOP3A-202ENST00000461127 SBSNQ6UWP8 590 aa15.7■□□□□ 0.1
TOP3A-202ENST00000461127 SLCO4C1Q6ZQN7 724 aa15.7■□□□□ 0.1
TOP3A-202ENST00000461127 CNPY4Q8N129 248 aa15.7■□□□□ 0.1
TOP3A-202ENST00000461127 MEIOBQ8N635 442 aa15.7■□□□□ 0.1
TOP3A-202ENST00000461127 SRFBP1Q8NEF9 429 aaKnown RBP15.7■□□□□ 0.1
TOP3A-202ENST00000461127 DCAKDQ8WVC6 231 aa15.7■□□□□ 0.1
TOP3A-202ENST00000461127 UCN3Q969E3 161 aa15.7■□□□□ 0.1
TOP3A-202ENST00000461127 INTS12Q96CB8 462 aaKnown RBP15.7■□□□□ 0.1
TOP3A-202ENST00000461127 RILPQ96NA2 401 aa15.7■□□□□ 0.1
TOP3A-202ENST00000461127 GNRHR2Q96P88 292 aa15.7■□□□□ 0.1
TOP3A-202ENST00000461127 MED18Q9BUE0 208 aa15.7■□□□□ 0.1
TOP3A-202ENST00000461127 NT5DC2Q9H857 520 aa15.7■□□□□ 0.1
TOP3A-202ENST00000461127 TBK1Q9UHD2 729 aa15.7■□□□□ 0.1
TOP3A-202ENST00000461127 ZNF180Q9UJW8 692 aa15.7■□□□□ 0.1
TOP3A-202ENST00000461127 PACSIN3Q9UKS6 424 aa15.7■□□□□ 0.1
TOP3A-202ENST00000461127 WDR47O94967 919 aa15.69■□□□□ 0.1
TOP3A-202ENST00000461127 TP53P04637 393 aaPredicted RBP15.69■□□□□ 0.1
TOP3A-202ENST00000461127 CNTFP26441 200 aa15.69■□□□□ 0.1
TOP3A-202ENST00000461127 GCAP28676 217 aa15.69■□□□□ 0.1
TOP3A-202ENST00000461127 RPP38P78345 283 aaKnown RBP15.69■□□□□ 0.1
TOP3A-202ENST00000461127 EIPR1Q53HC9 387 aa15.69■□□□□ 0.1
TOP3A-202ENST00000461127 WIPI1Q5MNZ9 446 aaPredicted RBP15.69■□□□□ 0.1
TOP3A-202ENST00000461127 DCST1Q5T197 706 aa15.69■□□□□ 0.1
TOP3A-202ENST00000461127 RNF111Q6ZNA4 994 aa15.69■□□□□ 0.1
TOP3A-202ENST00000461127 PLEKHM3Q6ZWE6 761 aa15.69■□□□□ 0.1
TOP3A-202ENST00000461127 GALNT7Q86SF2 657 aa15.69■□□□□ 0.1
TOP3A-202ENST00000461127 ANKRD9Q96BM1 317 aaPredicted RBP15.69■□□□□ 0.1
TOP3A-202ENST00000461127 PKNOX2Q96KN3 472 aa15.69■□□□□ 0.1
TOP3A-202ENST00000461127 WFIKKN1Q96NZ8 548 aa15.69■□□□□ 0.1
TOP3A-202ENST00000461127 RBBP8Q99708 897 aa15.69■□□□□ 0.1
TOP3A-202ENST00000461127 MAPKAP1Q9BPZ7 522 aa15.69■□□□□ 0.1
TOP3A-202ENST00000461127 CAPS2Q9BXY5 557 aa15.69■□□□□ 0.1
TOP3A-202ENST00000461127 WWTR1Q9GZV5 400 aa15.69■□□□□ 0.1
TOP3A-202ENST00000461127 STMN4Q9H169 189 aaPredicted RBP15.69■□□□□ 0.1
TOP3A-202ENST00000461127 RHOJQ9H4E5 214 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms