RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 TMEM211Q6ICI0 200 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 FBXL22Q6P050 247 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 PAQR3Q6TCH7 311 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.37□□□□□ -1.23
BRCC3-208ENST00000453705 Q6ZNB5 142 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 BHLHA15Q7RTS1 189 aaPredicted RBP7.37□□□□□ -1.23
BRCC3-208ENST00000453705 LHFPL4Q7Z7J7 247 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 TP53INP2Q8IXH6 220 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 CPXM2Q8N436 756 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 FADS6Q8N9I5 356 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 C2CD4AQ8NCU7 369 aaPredicted RBP7.37□□□□□ -1.23
BRCC3-208ENST00000453705 ARRDC2Q8TBH0 407 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 UTP4Q969X6 686 aaKnown RBP7.37□□□□□ -1.23
BRCC3-208ENST00000453705 NPAS2Q99743 824 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 SSX3Q99909 188 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 PSD2Q9BQI7 771 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 MANSC1Q9H8J5 431 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 POPDC3Q9HBV1 291 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 TIMMDC1Q9NPL8 285 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 FGFR1OP2Q9NVK5 253 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 SLC17A7Q9P2U7 560 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 PEF1Q9UBV8 284 aaKnown RBP7.37□□□□□ -1.23
BRCC3-208ENST00000453705 CRLS1Q9UJA2 301 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 ERRFI1Q9UJM3 462 aaPredicted RBP7.37□□□□□ -1.23
BRCC3-208ENST00000453705 UTS2RQ9UKP6 389 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 SORCS3Q9UPU3 1222 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 ERGIC3Q9Y282 383 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 STARD10Q9Y365 291 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 KIAA1549LQ6ZVL6 1849 aa7.37□□□□□ -1.23
BRCC3-208ENST00000453705 SMIM31A0A1B0GVY4 71 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 TMEM114B3SHH9 223 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 FAM47E-STBD1D6RA91 191 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 TNRC18O15417 2968 aaPredicted RBP7.36□□□□□ -1.23
BRCC3-208ENST00000453705 KDELR3O43731 214 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 UNC5CO95185 931 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 KAT7O95251 611 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 FGF19O95750 216 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 JCHAINP01591 159 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 ALDOAP04075 364 aaKnown RBP7.36□□□□□ -1.23
BRCC3-208ENST00000453705 PRKCGP05129 697 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 FGF1P05230 155 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 CAPN1P07384 714 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 CR2P20023 1033 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 F2RL1P55085 397 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 WDR5P61964 334 aaKnown RBP7.36□□□□□ -1.23
BRCC3-208ENST00000453705 MAT1AQ00266 395 aaKnown RBP7.36□□□□□ -1.23
BRCC3-208ENST00000453705 ABHD18Q0P651 414 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 SCRN3Q0VDG4 424 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 MAPK11Q15759 364 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 KHDRBS2Q5VWX1 349 aaKnown RBP7.36□□□□□ -1.23
BRCC3-208ENST00000453705 TEX38Q6PEX7 206 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 TECPR1Q7Z6L1 1165 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 ITIH5Q86UX2 942 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 PSMG2Q969U7 264 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 ZNF419Q96HQ0 510 aaPredicted RBP7.36□□□□□ -1.23
BRCC3-208ENST00000453705 RAX2Q96IS3 184 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 TRIB3Q96RU7 358 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 ANKRD60Q9BZ19 345 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 PITPNM3Q9BZ71 974 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 DPH1Q9BZG8 443 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 ZBP1Q9H171 429 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 TLE6Q9H808 572 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 FAIMQ9NVQ4 179 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 GPATCH2Q9NW75 528 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 ELOVL2Q9NXB9 296 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 KCNN3Q9UGI6 736 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 LNPEPQ9UIQ6 1025 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 YIPF1Q9Y548 306 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 FADS3Q9Y5Q0 445 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 SNX10Q9Y5X0 201 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 B3GALT1Q9Y5Z6 326 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 CEP290O15078 2479 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 EIF4E1BA6NMX2 242 aaKnown RBP7.36□□□□□ -1.23
BRCC3-208ENST00000453705 KCNK1O00180 336 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 MSI1O43347 362 aaKnown RBP7.36□□□□□ -1.23
BRCC3-208ENST00000453705 PLIN3O60664 434 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 CNTN5O94779 1100 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 HK1P19367 917 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 POLR2CP19387 275 aaPredicted RBP7.36□□□□□ -1.23
BRCC3-208ENST00000453705 SDHBP21912 280 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 HOXD9P28356 352 aaPredicted RBP7.36□□□□□ -1.23
BRCC3-208ENST00000453705 NTSR1P30989 418 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 PREPP48147 710 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 EPHA5P54756 1037 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 SLC7A9P82251 487 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 UQCC3Q6UW78 93 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 UTS2BQ765I0 119 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 RD3Q7Z3Z2 195 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 TMEM173Q86WV6 379 aaPredicted RBP7.36□□□□□ -1.23
BRCC3-208ENST00000453705 PLD3Q8IV08 490 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 BOD1L2Q8IYS8 172 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 C4orf33Q8N1A6 199 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 HJURPQ8NCD3 748 aaPredicted RBP7.36□□□□□ -1.23
BRCC3-208ENST00000453705 HCAR2Q8TDS4 363 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 LPGAT1Q92604 370 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 THOC3Q96J01 351 aaKnown RBP7.36□□□□□ -1.23
BRCC3-208ENST00000453705 C7orf50Q9BRJ6 194 aaKnown RBP7.36□□□□□ -1.23
BRCC3-208ENST00000453705 SEC22CQ9BRL7 303 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 MFSD1Q9H3U5 465 aa7.36□□□□□ -1.23
BRCC3-208ENST00000453705 TMEM185BQ9H7F4 350 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms