RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 ELOA3BQ3SY89 546 aa11.36□□□□□ -0.59
AC004540.1-204ENST00000449537 TIGD3Q6B0B8 471 aa11.36□□□□□ -0.59
AC004540.1-204ENST00000449537 ABHD17CQ6PCB6 329 aa11.36□□□□□ -0.59
AC004540.1-204ENST00000449537 MBOAT1Q6ZNC8 495 aa11.36□□□□□ -0.59
AC004540.1-204ENST00000449537 MCUQ8NE86 351 aa11.36□□□□□ -0.59
AC004540.1-204ENST00000449537 ELOA3Q8NG57 546 aa11.36□□□□□ -0.59
AC004540.1-204ENST00000449537 RAB3IL1Q8TBN0 382 aa11.36□□□□□ -0.59
AC004540.1-204ENST00000449537 SPPL2AQ8TCT8 520 aa11.36□□□□□ -0.59
AC004540.1-204ENST00000449537 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.36□□□□□ -0.59
AC004540.1-204ENST00000449537 CTHRC1Q96CG8 243 aa11.36□□□□□ -0.59
AC004540.1-204ENST00000449537 NTMT1Q9BV86 223 aa11.36□□□□□ -0.59
AC004540.1-204ENST00000449537 AICDAQ9GZX7 198 aa11.36□□□□□ -0.59
AC004540.1-204ENST00000449537 TSPYL1Q9H0U9 437 aa11.36□□□□□ -0.59
AC004540.1-204ENST00000449537 ETNK1Q9HBU6 452 aa11.36□□□□□ -0.59
AC004540.1-204ENST00000449537 XAB2Q9HCS7 855 aaKnown RBP11.36□□□□□ -0.59
AC004540.1-204ENST00000449537 WWOXQ9NZC7 414 aa11.36□□□□□ -0.59
AC004540.1-204ENST00000449537 PTBP2Q9UKA9 531 aaKnown RBP11.36□□□□□ -0.59
AC004540.1-204ENST00000449537 PRR14LQ5THK1 2151 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 A0A088AWK7 358 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 LOC100289279A0A1B0GTE1 492 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 GOLGA8KD6RF30 607 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 GOLGA8TH3BQL2 631 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 EMC8O43402 210 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 DYRK3O43781 588 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 ABCB7O75027 752 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 LDB3O75112 727 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 SEC31AO94979 1220 aaKnown RBP11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 CD8BP10966 210 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 MLNP12872 115 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 SLC25A16P16260 332 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 ZNF10P21506 573 aaPredicted RBP11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 NMBRP28336 390 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 CASP3P42574 277 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 COMPP49747 757 aaPredicted RBP11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 NUDT6P53370 316 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 LSM11P83369 360 aaKnown RBP eCLIP11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 KBTBD12Q3ZCT8 623 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 PRR31Q5SQ13 230 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 SBSNQ6UWP8 590 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 CHMP1BQ7LBR1 199 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 PIWIL4Q7Z3Z4 852 aaKnown RBP11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 SPNS2Q8IVW8 549 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 PALM2Q8IXS6 379 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 TAGAPQ8N103 731 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 C7orf57Q8NEG2 295 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 OR1J4Q8NGS1 313 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 GIMAP7Q8NHV1 300 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 GAL3ST3Q96A11 431 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 C11orf24Q96F05 449 aaPredicted RBP11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 TMEM41AQ96HV5 264 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 GAL3ST4Q96RP7 486 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 CSF3RQ99062 836 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 AIF1LQ9BQI0 150 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 ALG2Q9H553 416 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 PARVBQ9HBI1 364 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 TEX10Q9NXF1 929 aaPredicted RBP11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 RNF112Q9ULX5 631 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 DTX4Q9Y2E6 619 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 DLGAP4Q9Y2H0 992 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 DHRS7Q9Y394 339 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 RNF115Q9Y4L5 304 aa11.35□□□□□ -0.59
AC004540.1-204ENST00000449537 IQANK1A0A1B0GTG1 560 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 CLOCKO15516 846 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 ERI3O43414 337 aaKnown RBP11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 HCRTR2O43614 444 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 IGKV3-11P04433 115 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 FESP07332 822 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 APRTP07741 180 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 HIST1H2AGP0C0S8 130 aaPredicted RBP11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 HIST1H2ADP20671 130 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 LIM2P55344 173 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 FBXW4P57775 412 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 RPP38P78345 283 aaKnown RBP11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 ID2Q02363 134 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 FGFBP1Q14512 234 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 RPS6KA2Q15349 733 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 EXOC3L2Q2M3D2 409 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 RNASEH2BQ5TBB1 312 aaKnown RBP11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 DUPD1Q68J44 220 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 DNAJC14Q6Y2X3 702 aaPredicted RBP11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 TMEM64Q6YI46 380 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 SLC29A4Q7RTT9 530 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 KLHDC8AQ8IYD2 350 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 NOA1Q8NC60 698 aaKnown RBP11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 OR14L1PQ8NHC6 308 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 SLC5A11Q8WWX8 675 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 NEIL2Q969S2 332 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 MS4A6EQ96DS6 147 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 RBM18Q96H35 190 aaKnown RBP11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 HIST1H2AHQ96KK5 128 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 OR4K3Q96R72 315 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 HIST1H2AJQ99878 128 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 H2AFJQ9BTM1 129 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 ADAMTS6Q9UKP5 1117 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 DAPP1Q9UN19 280 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 PROCRQ9UNN8 238 aa11.34□□□□□ -0.59
AC004540.1-204ENST00000449537 SLC22A20A6NK97 555 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 CDH16O75309 829 aa11.33□□□□□ -0.6
AC004540.1-204ENST00000449537 CD8AP01732 235 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms