RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 MR1Q95460 341 aa18.02■□□□□ 0.47
RPS28-202ENST00000449223 DGAT2Q96PD7 388 aa18.02■□□□□ 0.47
RPS28-202ENST00000449223 ECSITQ9BQ95 431 aa18.02■□□□□ 0.47
RPS28-202ENST00000449223 ZCCHC3Q9NUD5 404 aaKnown RBP18.02■□□□□ 0.47
RPS28-202ENST00000449223 ACSL6Q9UKU0 697 aa18.02■□□□□ 0.47
RPS28-202ENST00000449223 PADI1Q9ULC6 663 aa18.02■□□□□ 0.47
RPS28-202ENST00000449223 C19orf53Q9UNZ5 99 aaPredicted RBP18.02■□□□□ 0.47
RPS28-202ENST00000449223 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.01■□□□□ 0.47
RPS28-202ENST00000449223 CDRT15L2A8MXV6 281 aa18.01■□□□□ 0.47
RPS28-202ENST00000449223 KLF7O75840 302 aaPredicted RBP18.01■□□□□ 0.47
RPS28-202ENST00000449223 TNFSF15O95150 251 aa18.01■□□□□ 0.47
RPS28-202ENST00000449223 RAB40ALP0C0E4 278 aa18.01■□□□□ 0.47
RPS28-202ENST00000449223 S1PR1P21453 382 aa18.01■□□□□ 0.47
RPS28-202ENST00000449223 CD82P27701 267 aa18.01■□□□□ 0.47
RPS28-202ENST00000449223 HTR1EP28566 365 aa18.01■□□□□ 0.47
RPS28-202ENST00000449223 CHI3L1P36222 383 aaPredicted RBP18.01■□□□□ 0.47
RPS28-202ENST00000449223 CORO7P57737 925 aa18.01■□□□□ 0.47
RPS28-202ENST00000449223 ELAVL1Q15717 326 aaKnown RBP18.01■□□□□ 0.47
RPS28-202ENST00000449223 NSDHLQ15738 373 aa18.01■□□□□ 0.47
RPS28-202ENST00000449223 TIPARPQ7Z3E1 657 aaKnown RBP18.01■□□□□ 0.47
RPS28-202ENST00000449223 C6orf120Q7Z4R8 191 aa18.01■□□□□ 0.47
RPS28-202ENST00000449223 CLEC4FQ8N1N0 589 aa18.01■□□□□ 0.47
RPS28-202ENST00000449223 C10orf111Q8N326 155 aa18.01■□□□□ 0.47
RPS28-202ENST00000449223 VWA5B2Q8N398 1253 aa18.01■□□□□ 0.47
RPS28-202ENST00000449223 OR10A6Q8NH74 314 aa18.01■□□□□ 0.47
RPS28-202ENST00000449223 RIT1Q92963 219 aa18.01■□□□□ 0.47
RPS28-202ENST00000449223 TSLPQ969D9 159 aa18.01■□□□□ 0.47
RPS28-202ENST00000449223 ASB9Q96DX5 294 aa18.01■□□□□ 0.47
RPS28-202ENST00000449223 RNF31Q96EP0 1072 aa18.01■□□□□ 0.47
RPS28-202ENST00000449223 GIMAP5Q96F15 307 aa18.01■□□□□ 0.47
RPS28-202ENST00000449223 ADAP2Q9NPF8 381 aa18.01■□□□□ 0.47
RPS28-202ENST00000449223 TEX51A0A1B0GUA7 166 aa18■□□□□ 0.47
RPS28-202ENST00000449223 FAM149AA5PLN7 773 aa18■□□□□ 0.47
RPS28-202ENST00000449223 FAM220BPB1ANY3 271 aa18■□□□□ 0.47
RPS28-202ENST00000449223 PCDH17O14917 1159 aa18■□□□□ 0.47
RPS28-202ENST00000449223 TNFRSF21O75509 655 aa18■□□□□ 0.47
RPS28-202ENST00000449223 PDE5AO76074 875 aa18■□□□□ 0.47
RPS28-202ENST00000449223 DXOO77932 396 aaKnown RBP18■□□□□ 0.47
RPS28-202ENST00000449223 CT62P0C5K7 136 aa18■□□□□ 0.47
RPS28-202ENST00000449223 CCNYL3P0C7X3 344 aa18■□□□□ 0.47
RPS28-202ENST00000449223 NT5EP21589 574 aa18■□□□□ 0.47
RPS28-202ENST00000449223 MRPS35P82673 323 aaKnown RBP18■□□□□ 0.47
RPS28-202ENST00000449223 FUT7Q11130 342 aa18■□□□□ 0.47
RPS28-202ENST00000449223 BNIP2Q12982 314 aa18■□□□□ 0.47
RPS28-202ENST00000449223 TRIM25Q14258 630 aaKnown RBP18■□□□□ 0.47
RPS28-202ENST00000449223 SPDYE7PQ495Y7 208 aa18■□□□□ 0.47
RPS28-202ENST00000449223 EXOSC6Q5RKV6 272 aaKnown RBP18■□□□□ 0.47
RPS28-202ENST00000449223 MFSD4BQ5TF39 518 aa18■□□□□ 0.47
RPS28-202ENST00000449223 FAM199XQ6PEV8 388 aaPredicted RBP18■□□□□ 0.47
RPS28-202ENST00000449223 DGAT2L6Q6ZPD8 337 aa18■□□□□ 0.47
RPS28-202ENST00000449223 ESX1Q8N693 406 aa18■□□□□ 0.47
RPS28-202ENST00000449223 RNF148Q8N7C7 305 aa18■□□□□ 0.47
RPS28-202ENST00000449223 FAM13CQ8NE31 585 aa18■□□□□ 0.47
RPS28-202ENST00000449223 KAT2AQ92830 837 aa18■□□□□ 0.47
RPS28-202ENST00000449223 PPWD1Q96BP3 646 aaKnown RBP18■□□□□ 0.47
RPS28-202ENST00000449223 REXO5Q96IC2 774 aaKnown RBP18■□□□□ 0.47
RPS28-202ENST00000449223 MS4A4EQ96PG1 132 aa18■□□□□ 0.47
RPS28-202ENST00000449223 MUC13Q9H3R2 512 aa18■□□□□ 0.47
RPS28-202ENST00000449223 DDX18Q9NVP1 670 aaKnown RBP18■□□□□ 0.47
RPS28-202ENST00000449223 GPN3Q9UHW5 284 aaPredicted RBP18■□□□□ 0.47
RPS28-202ENST00000449223 PTGER1P34995 402 aa17.99■□□□□ 0.47
RPS28-202ENST00000449223 GABREP78334 506 aa17.99■□□□□ 0.47
RPS28-202ENST00000449223 TRAP1Q12931 704 aaKnown RBP17.99■□□□□ 0.47
RPS28-202ENST00000449223 ADRM1Q16186 407 aa17.99■□□□□ 0.47
RPS28-202ENST00000449223 TRMT12Q53H54 448 aaKnown RBP17.99■□□□□ 0.47
RPS28-202ENST00000449223 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.99■□□□□ 0.47
RPS28-202ENST00000449223 MLIPQ5VWP3 458 aa17.99■□□□□ 0.47
RPS28-202ENST00000449223 FAM111BQ6SJ93 734 aa17.99■□□□□ 0.47
RPS28-202ENST00000449223 TMEM205Q6UW68 189 aa17.99■□□□□ 0.47
RPS28-202ENST00000449223 RNF130Q86XS8 419 aa17.99■□□□□ 0.47
RPS28-202ENST00000449223 NUP43Q8NFH3 380 aa17.99■□□□□ 0.47
RPS28-202ENST00000449223 OR2T12Q8NG77 320 aa17.99■□□□□ 0.47
RPS28-202ENST00000449223 OR2Y1Q8NGV0 311 aa17.99■□□□□ 0.47
RPS28-202ENST00000449223 PTPMT1Q8WUK0 201 aaPredicted RBP17.99■□□□□ 0.47
RPS28-202ENST00000449223 HOXB13Q92826 284 aaPredicted RBP17.99■□□□□ 0.47
RPS28-202ENST00000449223 NRSN2Q9GZP1 204 aa17.99■□□□□ 0.47
RPS28-202ENST00000449223 TMEM38AQ9H6F2 299 aa17.99■□□□□ 0.47
RPS28-202ENST00000449223 THUMPD1Q9NXG2 353 aaKnown RBP17.99■□□□□ 0.47
RPS28-202ENST00000449223 PACSIN3Q9UKS6 424 aa17.99■□□□□ 0.47
RPS28-202ENST00000449223 POMPQ9Y244 141 aa17.99■□□□□ 0.47
RPS28-202ENST00000449223 PIEZO1Q92508 2521 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 MYOCOSA0A1B0GUC4 107 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 ASNA1O43681 348 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 ALOX12BO75342 701 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 BCAS2O75934 225 aaPredicted RBP17.98■□□□□ 0.47
RPS28-202ENST00000449223 SORBS2O94875 1100 aaKnown RBP17.98■□□□□ 0.47
RPS28-202ENST00000449223 CBX7O95931 251 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 HMGN2P05204 90 aaKnown RBP17.98■□□□□ 0.47
RPS28-202ENST00000449223 HEXBP07686 556 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 SLC5A2P31639 672 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 TP53BP2Q13625 1128 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 COX20Q5RI15 118 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 ZCCHC12Q6PEW1 402 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 PRSS58Q8IYP2 241 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 TNIP2Q8NFZ5 429 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 PNPT1Q8TCS8 783 aaKnown RBP17.98■□□□□ 0.47
RPS28-202ENST00000449223 FBXL20Q96IG2 436 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 KCTD14Q9BQ13 255 aaPredicted RBP17.98■□□□□ 0.47
RPS28-202ENST00000449223 SERHL2Q9H4I8 314 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 SOX17Q9H6I2 414 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms