RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 SLC6A2P23975 617 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 SOAT1P35610 550 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 CCT3P49368 545 aaKnown RBP13.12□□□□□ -0.31
SHMT2-203ENST00000449049 PSME3P61289 254 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 MRPS35P82673 323 aaKnown RBP13.12□□□□□ -0.31
SHMT2-203ENST00000449049 TBC1D25Q3MII6 688 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 FAAH2Q6GMR7 532 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 NANOGP8Q6NSW7 305 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 FAM111BQ6SJ93 734 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 GPR155Q7Z3F1 870 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 ARPINQ7Z6K5 226 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 CLEC4FQ8N1N0 589 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 OR2L13Q8N349 312 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 VWA5B2Q8N398 1253 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 OR8J3Q8NGG0 315 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 LRMDAQ9H2I8 198 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 NANOGQ9H9S0 305 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 PNO1Q9NRX1 252 aaKnown RBP13.12□□□□□ -0.31
SHMT2-203ENST00000449049 C19orf25Q9UFG5 118 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-203ENST00000449049 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-203ENST00000449049 PTPRZ1P23471 2315 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-203ENST00000449049 RNF103-CHMP3A0A140T963 221 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 C17orf105B2RV13 164 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 UPK1AO00322 258 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 EMC8O43402 210 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 S1PR1P21453 382 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 OR4D2P58180 307 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 RPS18P62269 152 aaKnown RBP13.12□□□□□ -0.31
SHMT2-203ENST00000449049 DNAL1Q4LDG9 190 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 C6orf163Q5TEZ5 329 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 SAXO2Q658L1 398 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 CPEB2Q7Z5Q1 589 aaKnown RBP13.12□□□□□ -0.31
SHMT2-203ENST00000449049 DEFB107AQ8IZN7 70 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 OR5AK3PQ8NH89 298 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 OR14A16Q8NHC5 309 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 NEURL3Q96EH8 262 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 AURKBQ96GD4 344 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-203ENST00000449049 TPT1P8Q9HAU6 139 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 C3orf14Q9HBI5 128 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 ZCCHC3Q9NUD5 404 aaKnown RBP13.12□□□□□ -0.31
SHMT2-203ENST00000449049 KCND3Q9UK17 655 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 C19orf53Q9UNZ5 99 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-203ENST00000449049 CFAP54Q96N23 3096 aa13.12□□□□□ -0.31
SHMT2-203ENST00000449049 A0A1W2PQ72 361 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 CLIC1O00299 241 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 GYG2O15488 501 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 PSMG1O95456 288 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 C1QCP02747 245 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 TNNI3P19429 210 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 PPIBP23284 216 aaKnown RBP13.11□□□□□ -0.31
SHMT2-203ENST00000449049 MMP11P24347 488 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 PRR5P85299 388 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 FUT7Q11130 342 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 SELPLGQ14242 412 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 SSPNQ14714 243 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 SPDYE7PQ495Y7 208 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 TRMT12Q53H54 448 aaKnown RBP13.11□□□□□ -0.31
SHMT2-203ENST00000449049 SFT2D3Q587I9 215 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 ASRGL1Q7L266 308 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 IL22RA1Q8N6P7 574 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 OR56A1Q8NGH5 318 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 RNF217Q8TC41 542 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 TMEM125Q96AQ2 219 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 FBXL20Q96IG2 436 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 MESP1Q9BRJ9 268 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 IKZF5Q9H5V7 419 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 SPAG4Q9NPE6 437 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 DDX18Q9NVP1 670 aaKnown RBP13.11□□□□□ -0.31
SHMT2-203ENST00000449049 ABCD2Q9UBJ2 740 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 WDFY3Q8IZQ1 3526 aa13.11□□□□□ -0.31
SHMT2-203ENST00000449049 CBX7O95931 251 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 HOXD11P31277 338 aaPredicted RBP13.1□□□□□ -0.31
SHMT2-203ENST00000449049 MVDP53602 400 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 MTPNP58546 118 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 VAC14Q08AM6 782 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 ZNF267Q14586 743 aaPredicted RBP13.1□□□□□ -0.31
SHMT2-203ENST00000449049 RABL3Q5HYI8 236 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 BHLHB9Q6PI77 547 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 NUP43Q8NFH3 380 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 DOK4Q8TEW6 326 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 DAZLQ92904 295 aaKnown RBP13.1□□□□□ -0.31
SHMT2-203ENST00000449049 NACC2Q96BF6 587 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 MS4A4EQ96PG1 132 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 SH3GL1Q99961 368 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 WDR77Q9BQA1 342 aaPredicted RBP13.1□□□□□ -0.31
SHMT2-203ENST00000449049 TMEM121BQ9BXQ6 578 aaPredicted RBP13.1□□□□□ -0.31
SHMT2-203ENST00000449049 TRIM8Q9BZR9 551 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 ANKRA2Q9H9E1 313 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 HS3ST3B1Q9Y662 390 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 CLCA3PQ9Y6N3 262 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 CCDC88CQ9P219 2028 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 SAGE2PA6NJ88 616 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 A8MUA0 341 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 HRKO00198 91 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 DYRK3O43781 588 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 KRT75O95678 551 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 DDAH2O95865 285 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 CLPSP04118 112 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 CHI3L1P36222 383 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms