RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 BTNL10A8MVZ5 291 aa8.59□□□□□ -1.04
NIPBL-202ENST00000448238 AGPAT2O15120 278 aa8.59□□□□□ -1.04
NIPBL-202ENST00000448238 CTSOP43234 321 aaPredicted RBP8.59□□□□□ -1.04
NIPBL-202ENST00000448238 CSN1S1P47710 185 aa8.59□□□□□ -1.04
NIPBL-202ENST00000448238 PSMB3P49720 205 aa8.59□□□□□ -1.04
NIPBL-202ENST00000448238 AWAT2Q6E213 333 aa8.59□□□□□ -1.04
NIPBL-202ENST00000448238 SLC18B1Q6NT16 456 aa8.59□□□□□ -1.04
NIPBL-202ENST00000448238 SP8Q8IXZ3 490 aa8.59□□□□□ -1.04
NIPBL-202ENST00000448238 C1orf87Q8N0U7 546 aa8.59□□□□□ -1.04
NIPBL-202ENST00000448238 SLC41A2Q96JW4 573 aa8.59□□□□□ -1.04
NIPBL-202ENST00000448238 FAM84BQ96KN1 310 aaPredicted RBP8.59□□□□□ -1.04
NIPBL-202ENST00000448238 DCLRE1CQ96SD1 692 aaKnown RBP8.59□□□□□ -1.04
NIPBL-202ENST00000448238 POP1Q99575 1024 aaKnown RBP8.59□□□□□ -1.04
NIPBL-202ENST00000448238 PRDM12Q9H4Q4 367 aa8.59□□□□□ -1.04
NIPBL-202ENST00000448238 NT5DC2Q9H857 520 aa8.59□□□□□ -1.04
NIPBL-202ENST00000448238 ARHGAP20Q9P2F6 1191 aa8.59□□□□□ -1.04
NIPBL-202ENST00000448238 PAGE1O75459 146 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 CD48P09326 243 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 SMIM17P0DL12 118 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 ACPPP15309 386 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 LAP3P28838 519 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 MMP12P39900 470 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 PLA2G16P53816 162 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 TAS2R46P59540 309 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 LACC1Q8IV20 430 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 OR4K2Q8NGD2 314 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 AKT1S1Q96B36 256 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 SENP8Q96LD8 212 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 ZNF558Q96NG5 402 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 EBPLQ9BY08 206 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 POLDIP3Q9BY77 421 aaKnown RBP8.58□□□□□ -1.04
NIPBL-202ENST00000448238 J3QRK9 145 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 TGM5O43548 720 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 RNASEH2AO75792 299 aaKnown RBP8.58□□□□□ -1.04
NIPBL-202ENST00000448238 ADH4P08319 380 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 SPATA31D3P0C874 917 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 MYCLP1P12525 358 aaPredicted RBP8.58□□□□□ -1.04
NIPBL-202ENST00000448238 PTGER4P35408 488 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 BDKRB1P46663 353 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 SLAMF1Q13291 335 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 KIAA0895LQ68EN5 471 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 PDE12Q6L8Q7 609 aaKnown RBP8.58□□□□□ -1.04
NIPBL-202ENST00000448238 SPATA31D4Q6ZUB0 917 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 SLAIN1Q8ND83 568 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 IL17REQ8NFR9 667 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 OR6N2Q8NGY6 317 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 FBXL8Q96CD0 374 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 MOCOSQ96EN8 888 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 TSSK6Q9BXA6 273 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 IL21RQ9HBE5 538 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 DEC1Q9P2X7 70 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 A0A1B0GVT2 93 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 FUOMA2VDF0 154 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 MSCO60682 206 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 SHBGP04278 402 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 FHP07954 510 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 HOXA11P31270 313 aaPredicted RBP8.58□□□□□ -1.04
NIPBL-202ENST00000448238 ARL2P36404 184 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 PBX2P40425 430 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 MRPS34P82930 218 aaKnown RBP8.58□□□□□ -1.04
NIPBL-202ENST00000448238 ZC3H12AQ5D1E8 599 aaKnown RBP8.58□□□□□ -1.04
NIPBL-202ENST00000448238 MON1AQ86VX9 555 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 SMAP2Q8WU79 429 aaPredicted RBP8.58□□□□□ -1.04
NIPBL-202ENST00000448238 OSMRQ99650 979 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 GON7Q9BXV9 100 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 OR2AG1Q9H205 316 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 GOLGA2P5Q9HBQ8 144 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 ACOT13Q9NPJ3 140 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 SLC22A11Q9NSA0 550 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 SLC35D1Q9NTN3 355 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 HELTA6NFD8 242 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 TK1P04183 234 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 TIGD5Q53EQ6 642 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 HGSNATQ68CP4 663 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 KIAA0930Q6ICG6 404 aaPredicted RBP8.58□□□□□ -1.04
NIPBL-202ENST00000448238 TSSK4Q6SA08 328 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 OR7G3Q8NG95 312 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 FOXRED1Q96CU9 486 aaPredicted RBP8.58□□□□□ -1.04
NIPBL-202ENST00000448238 OR2M2Q96R28 347 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 PITX2Q99697 317 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 SIDT1Q9NXL6 827 aaKnown RBP8.58□□□□□ -1.04
NIPBL-202ENST00000448238 K7EPI3 171 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 RAB3DO95716 219 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 IMPDH1P20839 514 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 MRPL19P49406 292 aaKnown RBP8.58□□□□□ -1.04
NIPBL-202ENST00000448238 CHRNEQ04844 493 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 LRRC32Q14392 662 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 TMEM97Q5BJF2 176 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 PLEKHH3Q7Z736 793 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 LRRC28Q86X40 367 aaPredicted RBP8.58□□□□□ -1.04
NIPBL-202ENST00000448238 CMTM7Q96FZ5 175 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 BMFQ96LC9 184 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 ARHGDIGQ99819 225 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 IGFLR1Q9H665 355 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 PLEKHJ1Q9NW61 149 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 USP36Q9P275 1121 aaKnown RBP8.58□□□□□ -1.04
NIPBL-202ENST00000448238 PRODH2Q9UF12 536 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 KLHL21Q9UJP4 597 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 UGT2B7P16662 529 aa8.58□□□□□ -1.04
NIPBL-202ENST00000448238 NDUFV2P19404 249 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms