RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 SETD7Q8WTS6 366 aaKnown RBP7.43□□□□□ -1.22
NEDD9-204ENST00000448183 SGTBQ96EQ0 304 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 BORCS8Q96FH0 119 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF486Q96H40 463 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-204ENST00000448183 CNN2Q99439 309 aaKnown RBP7.43□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF649Q9BS31 505 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 GPN2Q9H9Y4 310 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-204ENST00000448183 ENY2Q9NPA8 101 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 ZCWPW2A0A1B0GU75 182 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 HCRTR2O43614 444 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 SSX5O60225 188 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 JRKO75564 520 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 PAHP00439 452 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 AK1P00568 194 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 IFNA5P01569 189 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 GALTP07902 379 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 CD3GP09693 182 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 PRKCAP17252 672 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 ENDOUP21128 410 aaKnown RBP7.43□□□□□ -1.22
NEDD9-204ENST00000448183 HTR6P50406 440 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 CAPZA1P52907 286 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 HSD11B2P80365 405 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 SLAMF1Q13291 335 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF805Q5CZA5 627 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 BCL2L15Q5TBC7 163 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 UNC5DQ6UXZ4 953 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 BEND4Q6ZU67 534 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 DTWD1Q8N5C7 304 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 ZSCAN1Q8NBB4 408 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 OR8K5Q8NH50 307 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 ADAMTS19Q8TE59 1207 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 ASB15Q8WXK1 588 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 IGSF8Q969P0 613 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 HERPUD2Q9BSE4 406 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 SRA1Q9HD15 236 aaKnown RBP7.43□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF226Q9NYT6 803 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 ENPP5Q9UJA9 477 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF860A6NHJ4 632 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 LEFTY2O00292 366 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 HMGCLP35914 325 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 ETV3P41162 512 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 RPS26P62854 115 aaKnown RBP7.42□□□□□ -1.22
NEDD9-204ENST00000448183 CRYZQ08257 329 aaKnown RBP7.42□□□□□ -1.22
NEDD9-204ENST00000448183 MLIPQ5VWP3 458 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 C1orf94Q6P1W5 598 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 GALNT10Q86SR1 603 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 SLC9B2Q86UD5 537 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 COMMD7Q86VX2 200 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 CLECL1Q8IZS7 167 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 TSTD1Q8NFU3 115 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 OR5M3Q8NGP4 307 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 FUBP1Q96AE4 644 aaKnown RBP7.42□□□□□ -1.22
NEDD9-204ENST00000448183 SLC25A44Q96H78 314 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-204ENST00000448183 TMEM19Q96HH6 336 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 LRIG1Q96JA1 1093 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 F2RL3Q96RI0 385 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 TREX2Q9BQ50 279 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-204ENST00000448183 RXFP3Q9NSD7 469 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 KLHL9Q9P2J3 617 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 ASB4Q9Y574 426 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 ANKRD12Q6UB98 2062 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 A0A0G2JMP0 313 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 A0A1W2PPL8 197 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 INPPL1O15357 1258 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 LEFTY1O75610 366 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 FGF4P08620 206 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 POLR2CP19387 275 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-204ENST00000448183 AMY2BP19961 511 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 ERVPABLB-1P60509 514 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF616Q08AN1 781 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF791Q3KP31 576 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-204ENST00000448183 PRRT3Q5FWE3 981 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 CATSPEREQ5SY80 951 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 BORAQ6PGQ7 559 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 LRFN4Q6PJG9 635 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 GSG1LQ6UXU4 331 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 ASPGQ86U10 573 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 SYT14Q8NB59 555 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 OR7G2Q8NG99 324 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 OR4M2Q8NGB6 313 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 HUS1BQ8NHY5 278 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 NRG4Q8WWG1 115 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 CNOT9Q92600 299 aaKnown RBP7.42□□□□□ -1.22
NEDD9-204ENST00000448183 NINJ1Q92982 152 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 TCEAL3Q969E4 200 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF597Q96LX8 424 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 PBDC1Q9BVG4 233 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-204ENST00000448183 SAV1Q9H4B6 383 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-204ENST00000448183 PRTFDC1Q9NRG1 225 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 POT1Q9NUX5 634 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 MRPL15Q9P015 296 aaKnown RBP7.42□□□□□ -1.22
NEDD9-204ENST00000448183 GLS2Q9UI32 602 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 PHLPP1O60346 1717 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 ARPC4-TTLL3A0A0A6YYG9 625 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 TMEM88BA6NKF7 163 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 COCHO43405 550 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 ARHGEF15O94989 841 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 FARS2O95363 451 aaKnown RBP7.42□□□□□ -1.22
NEDD9-204ENST00000448183 DRD5P21918 477 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms