RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 PDCD2Q16342 344 aaPredicted RBP15.18■□□□□ 0.02
SF3A1-204ENST00000447376 XKR7Q5GH72 579 aa15.18■□□□□ 0.02
SF3A1-204ENST00000447376 FHL5Q5TD97 284 aa15.18■□□□□ 0.02
SF3A1-204ENST00000447376 DGAT2L6Q6ZPD8 337 aa15.18■□□□□ 0.02
SF3A1-204ENST00000447376 RTL4Q6ZR62 310 aa15.18■□□□□ 0.02
SF3A1-204ENST00000447376 DND1Q8IYX4 353 aaKnown RBP15.18■□□□□ 0.02
SF3A1-204ENST00000447376 POGLUT1Q8NBL1 392 aa15.18■□□□□ 0.02
SF3A1-204ENST00000447376 PRR7Q8TB68 274 aa15.18■□□□□ 0.02
SF3A1-204ENST00000447376 NR4A3Q92570 626 aa15.18■□□□□ 0.02
SF3A1-204ENST00000447376 EXOSC8Q96B26 276 aaKnown RBP15.18■□□□□ 0.02
SF3A1-204ENST00000447376 TUBGCP3Q96CW5 907 aa15.18■□□□□ 0.02
SF3A1-204ENST00000447376 BBS4Q96RK4 519 aa15.18■□□□□ 0.02
SF3A1-204ENST00000447376 OR10A5Q9H207 317 aa15.18■□□□□ 0.02
SF3A1-204ENST00000447376 MYNNQ9NPC7 610 aa15.18■□□□□ 0.02
SF3A1-204ENST00000447376 BCAP29Q9UHQ4 241 aa15.18■□□□□ 0.02
SF3A1-204ENST00000447376 CES1P1Q9UKY3 287 aa15.18■□□□□ 0.02
SF3A1-204ENST00000447376 NTNG1Q9Y2I2 539 aa15.18■□□□□ 0.02
SF3A1-204ENST00000447376 TRPC5OSA6NMA1 111 aa15.17■□□□□ 0.02
SF3A1-204ENST00000447376 CAPN14A8MX76 684 aa15.17■□□□□ 0.02
SF3A1-204ENST00000447376 PEX11AO75192 247 aa15.17■□□□□ 0.02
SF3A1-204ENST00000447376 DDCP20711 480 aa15.17■□□□□ 0.02
SF3A1-204ENST00000447376 NTSP30990 170 aa15.17■□□□□ 0.02
SF3A1-204ENST00000447376 SOX3P41225 446 aa15.17■□□□□ 0.02
SF3A1-204ENST00000447376 UQCRFS1P47985 274 aa15.17■□□□□ 0.02
SF3A1-204ENST00000447376 TMED10P49755 219 aaKnown RBP15.17■□□□□ 0.02
SF3A1-204ENST00000447376 SLC37A1P57057 533 aa15.17■□□□□ 0.02
SF3A1-204ENST00000447376 ALDH6A1Q02252 535 aaKnown RBP15.17■□□□□ 0.02
SF3A1-204ENST00000447376 MAD2L1Q13257 205 aaPredicted RBP15.17■□□□□ 0.02
SF3A1-204ENST00000447376 KIAA0040Q15053 153 aa15.17■□□□□ 0.02
SF3A1-204ENST00000447376 ZNF468Q5VIY5 522 aaPredicted RBP15.17■□□□□ 0.02
SF3A1-204ENST00000447376 C9orf40Q8IXQ3 194 aa15.17■□□□□ 0.02
SF3A1-204ENST00000447376 FAM26EQ8N5C1 309 aa15.17■□□□□ 0.02
SF3A1-204ENST00000447376 OR2T11Q8NH01 316 aa15.17■□□□□ 0.02
SF3A1-204ENST00000447376 UCN3Q969E3 161 aa15.17■□□□□ 0.02
SF3A1-204ENST00000447376 SGCZQ96LD1 299 aa15.17■□□□□ 0.02
SF3A1-204ENST00000447376 BARD1Q99728 777 aaKnown RBP15.17■□□□□ 0.02
SF3A1-204ENST00000447376 WWTR1Q9GZV5 400 aa15.17■□□□□ 0.02
SF3A1-204ENST00000447376 PNPOQ9NVS9 261 aa15.17■□□□□ 0.02
SF3A1-204ENST00000447376 EIF3LQ9Y262 564 aaKnown RBP15.17■□□□□ 0.02
SF3A1-204ENST00000447376 ATP6AP2A0A1C7CYW4 349 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 HRKO00198 91 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 HDAC3O15379 428 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 ATP6AP2O75787 350 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 OR6B1O95007 311 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 CBX6O95503 412 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 P04436 131 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 ZNF24P17028 368 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 SSTR4P31391 388 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 ASMTP46597 345 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 OCRLQ01968 901 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 FUT7Q11130 342 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 MAP4K2Q12851 820 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 MRPL49Q13405 166 aaKnown RBP15.16■□□□□ 0.02
SF3A1-204ENST00000447376 EBPQ15125 230 aaKnown RBP15.16■□□□□ 0.02
SF3A1-204ENST00000447376 SMU1Q2TAY7 513 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 RFTN2Q52LD8 501 aaPredicted RBP15.16■□□□□ 0.02
SF3A1-204ENST00000447376 PIGGQ5H8A4 983 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.16■□□□□ 0.02
SF3A1-204ENST00000447376 FAM9CQ8IZT9 166 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 FNDC5Q8NAU1 212 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 GOLM1Q8NBJ4 401 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 PSD4Q8NDX1 1056 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 DOK4Q8TEW6 326 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 TP53INP1Q96A56 240 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 ERP27Q96DN0 273 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 MAGEB18Q96M61 343 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 TAAR6Q96RI8 345 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 SLX1AQ9BQ83 275 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 HES7Q9BYE0 225 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 SLC35C2Q9NQQ7 365 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 HEY2Q9UBP5 337 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 PRODH2Q9UF12 536 aa15.16■□□□□ 0.02
SF3A1-204ENST00000447376 TMEM200CA6NKL6 621 aa15.15■□□□□ 0.02
SF3A1-204ENST00000447376 ACOT7O00154 380 aa15.15■□□□□ 0.02
SF3A1-204ENST00000447376 PEX1O43933 1283 aa15.15■□□□□ 0.02
SF3A1-204ENST00000447376 SLITRK5O94991 958 aa15.15■□□□□ 0.02
SF3A1-204ENST00000447376 AGFG2O95081 481 aa15.15■□□□□ 0.02
SF3A1-204ENST00000447376 MEOX1P50221 254 aa15.15■□□□□ 0.02
SF3A1-204ENST00000447376 RPP38P78345 283 aaKnown RBP15.15■□□□□ 0.02
SF3A1-204ENST00000447376 PMP22Q01453 160 aa15.15■□□□□ 0.02
SF3A1-204ENST00000447376 PRICKLE4Q2TBC4 344 aa15.15■□□□□ 0.02
SF3A1-204ENST00000447376 EIF2S3LQ2VIR3 472 aaKnown RBP15.15■□□□□ 0.02
SF3A1-204ENST00000447376 ZNF750Q32MQ0 723 aa15.15■□□□□ 0.02
SF3A1-204ENST00000447376 C6orf136Q5SQH8 315 aa15.15■□□□□ 0.02
SF3A1-204ENST00000447376 GFRALQ6UXV0 394 aa15.15■□□□□ 0.02
SF3A1-204ENST00000447376 C16orf47Q6ZP98 133 aaPredicted RBP15.15■□□□□ 0.02
SF3A1-204ENST00000447376 GK5Q6ZS86 529 aa15.15■□□□□ 0.02
SF3A1-204ENST00000447376 TICAM1Q8IUC6 712 aa15.15■□□□□ 0.02
SF3A1-204ENST00000447376 CCDC116Q8IYX3 515 aa15.15■□□□□ 0.02
SF3A1-204ENST00000447376 LRRC34Q8IZ02 419 aa15.15■□□□□ 0.02
SF3A1-204ENST00000447376 MMP21Q8N119 569 aa15.15■□□□□ 0.02
SF3A1-204ENST00000447376 PIWIL2Q8TC59 973 aaKnown RBP15.15■□□□□ 0.02
SF3A1-204ENST00000447376 CNRIP1Q96F85 164 aaPredicted RBP15.15■□□□□ 0.02
SF3A1-204ENST00000447376 FCRL1Q96LA6 429 aa15.15■□□□□ 0.02
SF3A1-204ENST00000447376 C3orf30Q96M34 536 aa15.15■□□□□ 0.02
SF3A1-204ENST00000447376 C7orf26Q96N11 449 aa15.15■□□□□ 0.02
SF3A1-204ENST00000447376 NUF2Q9BZD4 464 aa15.15■□□□□ 0.02
SF3A1-204ENST00000447376 SACM1LQ9NTJ5 587 aa15.15■□□□□ 0.02
SF3A1-204ENST00000447376 MAT2BQ9NZL9 334 aa15.15■□□□□ 0.02
SF3A1-204ENST00000447376 SEC14L3Q9UDX4 400 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms