RNA–Protein interactions for RNA: ENST00000446921.6

SIK3-205, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIK3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-205ENST00000446921 USP3Q9Y6I4 520 aa15.13■□□□□ 0.01
SIK3-205ENST00000446921 TUBAL3A6NHL2 446 aa15.13■□□□□ 0.01
SIK3-205ENST00000446921 QSOX1O00391 747 aa15.13■□□□□ 0.01
SIK3-205ENST00000446921 BDKRB1P46663 353 aa15.13■□□□□ 0.01
SIK3-205ENST00000446921 LAMTOR4Q0VGL1 99 aa15.13■□□□□ 0.01
SIK3-205ENST00000446921 FABP9Q0Z7S8 132 aa15.13■□□□□ 0.01
SIK3-205ENST00000446921 SNTB2Q13425 540 aaKnown RBP15.13■□□□□ 0.01
SIK3-205ENST00000446921 PTPRNQ16849 979 aa15.13■□□□□ 0.01
SIK3-205ENST00000446921 HHIPL2Q6UWX4 724 aa15.13■□□□□ 0.01
SIK3-205ENST00000446921 USP50Q70EL3 339 aaPredicted RBP15.13■□□□□ 0.01
SIK3-205ENST00000446921 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.13■□□□□ 0.01
SIK3-205ENST00000446921 C12orf40Q86WS4 652 aa15.13■□□□□ 0.01
SIK3-205ENST00000446921 TMIEQ8NEW7 156 aa15.13■□□□□ 0.01
SIK3-205ENST00000446921 KLRG1Q96E93 195 aa15.13■□□□□ 0.01
SIK3-205ENST00000446921 TMEM134Q9H6X4 195 aa15.13■□□□□ 0.01
SIK3-205ENST00000446921 IMP3Q9NV31 184 aaKnown RBP15.13■□□□□ 0.01
SIK3-205ENST00000446921 RPL36Q9Y3U8 105 aaKnown RBP15.13■□□□□ 0.01
SIK3-205ENST00000446921 SNX11Q9Y5W9 270 aa15.13■□□□□ 0.01
SIK3-205ENST00000446921 URADA6NGE7 173 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 TLX2O43763 284 aaPredicted RBP15.12■□□□□ 0.01
SIK3-205ENST00000446921 PIGRP01833 764 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 ZNF8P17098 575 aaPredicted RBP15.12■□□□□ 0.01
SIK3-205ENST00000446921 CELP19835 753 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 NHLRC3Q5JS37 347 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 PAPD4Q6PIY7 484 aaKnown RBP15.12■□□□□ 0.01
SIK3-205ENST00000446921 TSPAN33Q86UF1 283 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 B3GALNT2Q8NCR0 500 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 BPIFCQ8NFQ6 507 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 MAL2Q969L2 176 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 GAL3ST3Q96A11 431 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 LINGO1Q96FE5 620 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 SLC6A20Q9NP91 592 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 FAM198AQ9UFP1 575 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 IRAK3Q9Y616 596 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 A8MXK9 166 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 UPK3BL1B0FP48 263 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 UPK3BL2E5RIL1 263 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 SEPT4O43236 478 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 LANCL1O43813 399 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 VTNP04004 478 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 MSRB3Q8IXL7 192 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 PRSS58Q8IYP2 241 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 WFIKKN2Q8TEU8 576 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 MSLNLQ96KJ4 702 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 ATOH8Q96SQ7 321 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 CDT1Q9H211 546 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 ACTL8Q9H568 366 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 TMEM138Q9NPI0 162 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 DZANK1Q9NVP4 752 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 CFAP97Q9P2B7 532 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 MPZL2O60487 215 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 SLC6A1P30531 599 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 CRATP43155 626 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 STK19P49842 368 aaPredicted RBP15.12■□□□□ 0.01
SIK3-205ENST00000446921 NFKB2Q00653 900 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 HTR4Q13639 388 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 SLITRK4Q8IW52 837 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 CARFQ8N187 725 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 SVBPQ8N300 66 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 FAM46DQ8NEK8 389 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 PIGQQ9BRB3 760 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 PCTPQ9UKL6 214 aa15.12■□□□□ 0.01
SIK3-205ENST00000446921 OR10H3O60404 316 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 PRSS56P0CW18 603 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 GJA1P17302 382 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 S100A11P31949 105 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 RFC3P40938 356 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 KRT33BQ14525 404 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 GINS1Q14691 196 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 ACER2Q5QJU3 275 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 SLC30A6Q6NXT4 461 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 GSG1LQ6UXU4 331 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 ZNF248Q8NDW4 579 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 PXT1Q8NFP0 134 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 GLIS2Q9BZE0 524 aaPredicted RBP15.11■□□□□ 0.01
SIK3-205ENST00000446921 WWOXQ9NZC7 414 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 ZNF225Q9UK10 706 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 RFXAPO00287 272 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 MSCO60682 206 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 PAK4O96013 591 aaPredicted RBP15.11■□□□□ 0.01
SIK3-205ENST00000446921 SMPD1P17405 629 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 DDX39BQ13838 428 aaKnown RBP15.11■□□□□ 0.01
SIK3-205ENST00000446921 ZNF628Q5EBL2 1059 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 CMIPQ8IY22 773 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 HDDC3Q8N4P3 179 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 TMEM163Q8TC26 289 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 POP5Q969H6 163 aaKnown RBP15.11■□□□□ 0.01
SIK3-205ENST00000446921 MRPS24Q96EL2 167 aaKnown RBP15.11■□□□□ 0.01
SIK3-205ENST00000446921 CPNE2Q96FN4 548 aaPredicted RBP15.11■□□□□ 0.01
SIK3-205ENST00000446921 LMAN2LQ9H0V9 348 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 MARK1Q9P0L2 795 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 WNT9AO14904 365 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 NR0B1P51843 470 aaKnown RBP15.11■□□□□ 0.01
SIK3-205ENST00000446921 GMFBP60983 142 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 ZXDBP98169 803 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 AADACL4Q5VUY2 407 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 SKA2Q8WVK7 121 aaPredicted RBP15.11■□□□□ 0.01
SIK3-205ENST00000446921 PPP1R3EQ9H7J1 279 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 HEBP1Q9NRV9 189 aa15.11■□□□□ 0.01
SIK3-205ENST00000446921 CNOT2Q9NZN8 540 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms