RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 MC3RP41968 323 aa14.1□□□□□ -0.15
CCNE1-203ENST00000444983 NUDT2P50583 147 aa14.1□□□□□ -0.15
CCNE1-203ENST00000444983 IL10RAQ13651 578 aa14.1□□□□□ -0.15
CCNE1-203ENST00000444983 NFYCQ13952 458 aa14.1□□□□□ -0.15
CCNE1-203ENST00000444983 SFT2D3Q587I9 215 aa14.1□□□□□ -0.15
CCNE1-203ENST00000444983 RUNDC3AQ59EK9 446 aa14.1□□□□□ -0.15
CCNE1-203ENST00000444983 KIRREL2Q6UWL6 708 aa14.1□□□□□ -0.15
CCNE1-203ENST00000444983 DNAJC14Q6Y2X3 702 aaPredicted RBP14.1□□□□□ -0.15
CCNE1-203ENST00000444983 RINLQ6ZS11 566 aa14.1□□□□□ -0.15
CCNE1-203ENST00000444983 ZNF621Q6ZSS3 439 aa14.1□□□□□ -0.15
CCNE1-203ENST00000444983 GPR155Q7Z3F1 870 aa14.1□□□□□ -0.15
CCNE1-203ENST00000444983 PPP1R32Q7Z5V6 425 aa14.1□□□□□ -0.15
CCNE1-203ENST00000444983 YTHDF3Q7Z739 585 aaKnown RBP14.1□□□□□ -0.15
CCNE1-203ENST00000444983 RBM15BQ8NDT2 890 aaKnown RBP14.1□□□□□ -0.15
CCNE1-203ENST00000444983 NFAM1Q8NET5 270 aaPredicted RBP14.1□□□□□ -0.15
CCNE1-203ENST00000444983 ZFP90Q8TF47 636 aa14.1□□□□□ -0.15
CCNE1-203ENST00000444983 KAT2AQ92830 837 aa14.1□□□□□ -0.15
CCNE1-203ENST00000444983 ANKRD27Q96NW4 1050 aa14.1□□□□□ -0.15
CCNE1-203ENST00000444983 SLC39A3Q9BRY0 314 aa14.1□□□□□ -0.15
CCNE1-203ENST00000444983 ANKRA2Q9H9E1 313 aa14.1□□□□□ -0.15
CCNE1-203ENST00000444983 PNO1Q9NRX1 252 aaKnown RBP14.1□□□□□ -0.15
CCNE1-203ENST00000444983 GPATCH2Q9NW75 528 aa14.1□□□□□ -0.15
CCNE1-203ENST00000444983 PTGFRNQ9P2B2 879 aa14.1□□□□□ -0.15
CCNE1-203ENST00000444983 C19orf25Q9UFG5 118 aaPredicted RBP14.1□□□□□ -0.15
CCNE1-203ENST00000444983 VPS4AQ9UN37 437 aa14.1□□□□□ -0.15
CCNE1-203ENST00000444983 C19orf53Q9UNZ5 99 aaPredicted RBP14.1□□□□□ -0.15
CCNE1-203ENST00000444983 SSUH2Q9Y2M2 353 aa14.1□□□□□ -0.15
CCNE1-203ENST00000444983 MRPS18BQ9Y676 258 aaKnown RBP14.1□□□□□ -0.15
CCNE1-203ENST00000444983 FRYQ5TBA9 3013 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 TLX3O43711 291 aaPredicted RBP14.09□□□□□ -0.15
CCNE1-203ENST00000444983 CREG1O75629 220 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 ATP5HO75947 161 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 CBX7O95931 251 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 IFNA16P05015 189 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 LIFP15018 202 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 GPC1P35052 558 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 CCT3P49368 545 aaKnown RBP14.09□□□□□ -0.15
CCNE1-203ENST00000444983 MVDP53602 400 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 OR4D2P58180 307 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 DUSP8Q13202 625 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 LACTB2Q53H82 288 aaPredicted RBP14.09□□□□□ -0.15
CCNE1-203ENST00000444983 NANOGP8Q6NSW7 305 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 CLEC4FQ8N1N0 589 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 VWA5B2Q8N398 1253 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 TRIML2Q8N7C3 387 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 OR11G2Q8NGC1 345 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 OR14A16Q8NHC5 309 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 SNIP1Q8TAD8 396 aaKnown RBP14.09□□□□□ -0.15
CCNE1-203ENST00000444983 SFXN5Q8TD22 340 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 ZNF721Q8TF20 911 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 GATA6Q92908 595 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 C8orf44Q96CB5 159 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 GIMAP5Q96F15 307 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 SENP5Q96HI0 755 aaPredicted RBP14.09□□□□□ -0.15
CCNE1-203ENST00000444983 FBXL20Q96IG2 436 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 HOPXQ9BPY8 73 aaPredicted RBP14.09□□□□□ -0.15
CCNE1-203ENST00000444983 IKZF5Q9H5V7 419 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 NANOGQ9H9S0 305 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 GPN2Q9H9Y4 310 aaPredicted RBP14.09□□□□□ -0.15
CCNE1-203ENST00000444983 GID8Q9NWU2 228 aa14.09□□□□□ -0.15
CCNE1-203ENST00000444983 IGHV1-45A0A0A0MS14 117 aa14.08□□□□□ -0.16
CCNE1-203ENST00000444983 IGHV3-20A0A0C4DH32 117 aa14.08□□□□□ -0.16
CCNE1-203ENST00000444983 EMC8O43402 210 aa14.08□□□□□ -0.16
CCNE1-203ENST00000444983 HNRNPCL1O60812 293 aaKnown RBP14.08□□□□□ -0.16
CCNE1-203ENST00000444983 COX6A1P12074 109 aa14.08□□□□□ -0.16
CCNE1-203ENST00000444983 SLC25A3Q00325 362 aa14.08□□□□□ -0.16
CCNE1-203ENST00000444983 ART3Q13508 389 aa14.08□□□□□ -0.16
CCNE1-203ENST00000444983 CAPRIN1Q14444 709 aaKnown RBP14.08□□□□□ -0.16
CCNE1-203ENST00000444983 PCOLCEQ15113 449 aa14.08□□□□□ -0.16
CCNE1-203ENST00000444983 ZSCAN26Q16670 478 aa14.08□□□□□ -0.16
CCNE1-203ENST00000444983 EXOSC6Q5RKV6 272 aaKnown RBP14.08□□□□□ -0.16
CCNE1-203ENST00000444983 SAXO2Q658L1 398 aa14.08□□□□□ -0.16
CCNE1-203ENST00000444983 ZNF615Q8N8J6 731 aa14.08□□□□□ -0.16
CCNE1-203ENST00000444983 MORN4Q8NDC4 146 aa14.08□□□□□ -0.16
CCNE1-203ENST00000444983 DOK4Q8TEW6 326 aa14.08□□□□□ -0.16
CCNE1-203ENST00000444983 HOXB13Q92826 284 aaPredicted RBP14.08□□□□□ -0.16
CCNE1-203ENST00000444983 DAZLQ92904 295 aaKnown RBP14.08□□□□□ -0.16
CCNE1-203ENST00000444983 MOAP1Q96BY2 351 aa14.08□□□□□ -0.16
CCNE1-203ENST00000444983 NEURL3Q96EH8 262 aa14.08□□□□□ -0.16
CCNE1-203ENST00000444983 AURKBQ96GD4 344 aaPredicted RBP14.08□□□□□ -0.16
CCNE1-203ENST00000444983 IMMP1LQ96LU5 166 aa14.08□□□□□ -0.16
CCNE1-203ENST00000444983 SLC35A5Q9BS91 424 aa14.08□□□□□ -0.16
CCNE1-203ENST00000444983 SEMA4CQ9C0C4 833 aa14.08□□□□□ -0.16
CCNE1-203ENST00000444983 ZNF700Q9H0M5 742 aa14.08□□□□□ -0.16
CCNE1-203ENST00000444983 TPT1P8Q9HAU6 139 aa14.08□□□□□ -0.16
CCNE1-203ENST00000444983 IL1RL2Q9HB29 575 aa14.08□□□□□ -0.16
CCNE1-203ENST00000444983 SNX8Q9Y5X2 465 aa14.08□□□□□ -0.16
CCNE1-203ENST00000444983 CLCA3PQ9Y6N3 262 aa14.08□□□□□ -0.16
CCNE1-203ENST00000444983 APC2O95996 2303 aa14.08□□□□□ -0.16
CCNE1-203ENST00000444983 SAGE2PA6NJ88 616 aa14.07□□□□□ -0.16
CCNE1-203ENST00000444983 A8MUA0 341 aa14.07□□□□□ -0.16
CCNE1-203ENST00000444983 ANP32DO95626 131 aa14.07□□□□□ -0.16
CCNE1-203ENST00000444983 GPX2P18283 190 aa14.07□□□□□ -0.16
CCNE1-203ENST00000444983 TNNI3P19429 210 aa14.07□□□□□ -0.16
CCNE1-203ENST00000444983 SLC37A1P57057 533 aa14.07□□□□□ -0.16
CCNE1-203ENST00000444983 ZNF267Q14586 743 aaPredicted RBP14.07□□□□□ -0.16
CCNE1-203ENST00000444983 CCDC121Q6ZUS5 278 aa14.07□□□□□ -0.16
CCNE1-203ENST00000444983 PGAM4Q8N0Y7 254 aa14.07□□□□□ -0.16
CCNE1-203ENST00000444983 AMER2Q8N7J2 671 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms