RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 GALNT18Q6P9A2 607 aa16.43■□□□□ 0.22
CCDC188-201ENST00000439765 MORN4Q8NDC4 146 aa16.43■□□□□ 0.22
CCDC188-201ENST00000439765 OR4K14Q8NGD5 310 aa16.43■□□□□ 0.22
CCDC188-201ENST00000439765 OR1N1Q8NGS0 311 aa16.43■□□□□ 0.22
CCDC188-201ENST00000439765 KLHL29Q96CT2 875 aa16.43■□□□□ 0.22
CCDC188-201ENST00000439765 BARD1Q99728 777 aaKnown RBP16.43■□□□□ 0.22
CCDC188-201ENST00000439765 PELOQ9BRX2 385 aaKnown RBP16.43■□□□□ 0.22
CCDC188-201ENST00000439765 FAIM2Q9BWQ8 316 aa16.43■□□□□ 0.22
CCDC188-201ENST00000439765 RNF32Q9H0A6 362 aa16.43■□□□□ 0.22
CCDC188-201ENST00000439765 ASF1BQ9NVP2 202 aa16.43■□□□□ 0.22
CCDC188-201ENST00000439765 HEY2Q9UBP5 337 aa16.43■□□□□ 0.22
CCDC188-201ENST00000439765 COPS7AQ9UBW8 275 aa16.43■□□□□ 0.22
CCDC188-201ENST00000439765 PCDHGA10Q9Y5H3 936 aa16.43■□□□□ 0.22
CCDC188-201ENST00000439765 DYRK3O43781 588 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 ERAL1O75616 437 aaKnown RBP16.42■□□□□ 0.22
CCDC188-201ENST00000439765 PTGER1P34995 402 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 ERVK-8P63133 956 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 EMX2Q04743 252 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 ZNF763Q0D2J5 394 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 MRPL49Q13405 166 aaKnown RBP16.42■□□□□ 0.22
CCDC188-201ENST00000439765 TUBA3CQ13748 450 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 OGFOD2Q6N063 350 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 TUBA3EQ6PEY2 450 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 C16orf47Q6ZP98 133 aaPredicted RBP16.42■□□□□ 0.22
CCDC188-201ENST00000439765 ZNF721Q8TF20 911 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 C16orf78Q8WTQ4 265 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 HAS2Q92819 552 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 RIT1Q92963 219 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 FBXL20Q96IG2 436 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 LIN28AQ9H9Z2 209 aaKnown RBP16.42■□□□□ 0.22
CCDC188-201ENST00000439765 SIRT5Q9NXA8 310 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 ERVK-19Q9WJR5 959 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 TMED5Q9Y3A6 229 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 NOTCH2Q04721 2471 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 SLC35E2P0CK97 266 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 CPMP14384 443 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 XKP51811 444 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 MLF1P58340 268 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 RPL38P63173 70 aaKnown RBP16.42■□□□□ 0.22
CCDC188-201ENST00000439765 OC90Q02509 493 aaPredicted RBP16.42■□□□□ 0.22
CCDC188-201ENST00000439765 ZNF468Q5VIY5 522 aaPredicted RBP16.42■□□□□ 0.22
CCDC188-201ENST00000439765 HSDL2Q6YN16 418 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 SPATA19Q7Z5L4 167 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 LGI4Q8N135 537 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 CISD2Q8N5K1 135 aaKnown RBP16.42■□□□□ 0.22
CCDC188-201ENST00000439765 FNDC5Q8NAU1 212 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 C7orf57Q8NEG2 295 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 SSC4DQ8WTU2 575 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 SENP5Q96HI0 755 aaPredicted RBP16.42■□□□□ 0.22
CCDC188-201ENST00000439765 FCRL1Q96LA6 429 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 SIGLEC12Q96PQ1 595 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 UTP23Q9BRU9 249 aaKnown RBP16.42■□□□□ 0.22
CCDC188-201ENST00000439765 UTS2RQ9UKP6 389 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 CES1P1Q9UKY3 287 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 ARL2BPQ9Y2Y0 163 aa16.42■□□□□ 0.22
CCDC188-201ENST00000439765 TRAV17A0A0B4J275 112 aa16.41■□□□□ 0.22
CCDC188-201ENST00000439765 E9PBE3 544 aa16.41■□□□□ 0.22
CCDC188-201ENST00000439765 FCHO1O14526 889 aa16.41■□□□□ 0.22
CCDC188-201ENST00000439765 SEMA7AO75326 666 aa16.41■□□□□ 0.22
CCDC188-201ENST00000439765 ITGA10O75578 1167 aa16.41■□□□□ 0.22
CCDC188-201ENST00000439765 ZFAND5O76080 213 aa16.41■□□□□ 0.22
CCDC188-201ENST00000439765 FEN1P39748 380 aaKnown RBP16.41■□□□□ 0.22
CCDC188-201ENST00000439765 MAD2L1Q13257 205 aaPredicted RBP16.41■□□□□ 0.22
CCDC188-201ENST00000439765 BIKQ13323 160 aa16.41■□□□□ 0.22
CCDC188-201ENST00000439765 ZNF267Q14586 743 aaPredicted RBP16.41■□□□□ 0.22
CCDC188-201ENST00000439765 OR1C1Q15619 314 aa16.41■□□□□ 0.22
CCDC188-201ENST00000439765 SPRED3Q2MJR0 410 aa16.41■□□□□ 0.22
CCDC188-201ENST00000439765 METTL21CQ5VZV1 264 aa16.41■□□□□ 0.22
CCDC188-201ENST00000439765 TMEM198Q66K66 360 aa16.41■□□□□ 0.22
CCDC188-201ENST00000439765 NOXRED1Q6NXP6 359 aa16.41■□□□□ 0.22
CCDC188-201ENST00000439765 GALNT12Q8IXK2 581 aa16.41■□□□□ 0.22
CCDC188-201ENST00000439765 CCDC197Q8NCU1 140 aa16.41■□□□□ 0.22
CCDC188-201ENST00000439765 EXOSC8Q96B26 276 aaKnown RBP16.41■□□□□ 0.22
CCDC188-201ENST00000439765 ART5Q96L15 291 aa16.41■□□□□ 0.22
CCDC188-201ENST00000439765 EML6Q6ZMW3 1958 aa16.41■□□□□ 0.22
CCDC188-201ENST00000439765 EXPH5Q8NEV8 1989 aa16.41■□□□□ 0.22
CCDC188-201ENST00000439765 MYO7BQ6PIF6 2116 aa16.4■□□□□ 0.22
CCDC188-201ENST00000439765 TMEM200CA6NKL6 621 aa16.4■□□□□ 0.22
CCDC188-201ENST00000439765 WWP2O00308 870 aa16.4■□□□□ 0.22
CCDC188-201ENST00000439765 UBDO15205 165 aa16.4■□□□□ 0.22
CCDC188-201ENST00000439765 CBX6O95503 412 aa16.4■□□□□ 0.22
CCDC188-201ENST00000439765 IGKV3-11P04433 115 aa16.4■□□□□ 0.22
CCDC188-201ENST00000439765 ALDOCP09972 364 aaKnown RBP16.4■□□□□ 0.22
CCDC188-201ENST00000439765 NT5EP21589 574 aa16.4■□□□□ 0.22
CCDC188-201ENST00000439765 CD96P40200 585 aa16.4■□□□□ 0.22
CCDC188-201ENST00000439765 DUSP2Q05923 314 aa16.4■□□□□ 0.22
CCDC188-201ENST00000439765 HEPACAMQ14CZ8 416 aa16.4■□□□□ 0.22
CCDC188-201ENST00000439765 EIF2S3LQ2VIR3 472 aaKnown RBP16.4■□□□□ 0.22
CCDC188-201ENST00000439765 IL23RQ5VWK5 629 aa16.4■□□□□ 0.22
CCDC188-201ENST00000439765 C9orf40Q8IXQ3 194 aa16.4■□□□□ 0.22
CCDC188-201ENST00000439765 ANKS4BQ8N8V4 417 aa16.4■□□□□ 0.22
CCDC188-201ENST00000439765 SUN3Q8TAQ9 357 aa16.4■□□□□ 0.22
CCDC188-201ENST00000439765 CNRIP1Q96F85 164 aaPredicted RBP16.4■□□□□ 0.22
CCDC188-201ENST00000439765 C1orf50Q9BV19 199 aa16.4■□□□□ 0.22
CCDC188-201ENST00000439765 HES7Q9BYE0 225 aa16.4■□□□□ 0.22
CCDC188-201ENST00000439765 CXorf21Q9HAI6 301 aa16.4■□□□□ 0.22
CCDC188-201ENST00000439765 ASIC5Q9NY37 505 aa16.4■□□□□ 0.22
CCDC188-201ENST00000439765 TRIM33Q9UPN9 1127 aa16.4■□□□□ 0.22
CCDC188-201ENST00000439765 EIF3LQ9Y262 564 aaKnown RBP16.4■□□□□ 0.22
CCDC188-201ENST00000439765 NTNG1Q9Y2I2 539 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms