RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 FAM173AQ9BQD7 235 aa22.84■■□□□ 1.25
RAPGEF1-206ENST00000438647 MAT2BQ9NZL9 334 aa22.84■■□□□ 1.25
RAPGEF1-206ENST00000438647 TRGV8A0A0C4DH27 118 aa22.83■■□□□ 1.25
RAPGEF1-206ENST00000438647 NPIPB8E9PQR5 432 aa22.83■■□□□ 1.25
RAPGEF1-206ENST00000438647 SLC19A2O60779 497 aa22.83■■□□□ 1.25
RAPGEF1-206ENST00000438647 FBXO45P0C2W1 286 aa22.83■■□□□ 1.25
RAPGEF1-206ENST00000438647 CREB1P16220 341 aa22.83■■□□□ 1.25
RAPGEF1-206ENST00000438647 DDCP20711 480 aa22.83■■□□□ 1.25
RAPGEF1-206ENST00000438647 CNR1P21554 472 aa22.83■■□□□ 1.25
RAPGEF1-206ENST00000438647 PRPH2P23942 346 aa22.83■■□□□ 1.25
RAPGEF1-206ENST00000438647 TMED10P49755 219 aaKnown RBP22.83■■□□□ 1.25
RAPGEF1-206ENST00000438647 NRG3P56975 720 aa22.83■■□□□ 1.25
RAPGEF1-206ENST00000438647 CEP85LQ5SZL2 805 aa22.83■■□□□ 1.25
RAPGEF1-206ENST00000438647 C1QL3Q5VWW1 255 aa22.83■■□□□ 1.25
RAPGEF1-206ENST00000438647 SLC22A10Q63ZE4 541 aa22.83■■□□□ 1.25
RAPGEF1-206ENST00000438647 RGS9BPQ6ZS82 235 aa22.83■■□□□ 1.25
RAPGEF1-206ENST00000438647 FAM47EQ6ZV65 393 aa22.83■■□□□ 1.25
RAPGEF1-206ENST00000438647 ZNF441Q8N8Z8 693 aa22.83■■□□□ 1.25
RAPGEF1-206ENST00000438647 CDC26Q8NHZ8 85 aa22.83■■□□□ 1.25
RAPGEF1-206ENST00000438647 EXOSC8Q96B26 276 aaKnown RBP22.83■■□□□ 1.25
RAPGEF1-206ENST00000438647 SSU72Q9NP77 194 aaKnown RBP22.83■■□□□ 1.25
RAPGEF1-206ENST00000438647 DEPPQ9NTK1 212 aa22.83■■□□□ 1.25
RAPGEF1-206ENST00000438647 FIS1Q9Y3D6 152 aa22.83■■□□□ 1.25
RAPGEF1-206ENST00000438647 CTIFO43310 598 aaKnown RBP22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 SEC22BO75396 215 aa22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 BPGMP07738 259 aa22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 FGF4P08620 206 aa22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 S1PR1P21453 382 aa22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 RFC3P40938 356 aa22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 NR0B1P51843 470 aaKnown RBP22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 PLGLB1Q02325 96 aa22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 C2orf80Q0P641 193 aa22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 ARL13AQ5H913 290 aaPredicted RBP22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 KANK2Q63ZY3 851 aa22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 NOXRED1Q6NXP6 359 aa22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 LYPD8Q6UX82 237 aa22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 FJX1Q86VR8 437 aa22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 CLYBLQ8N0X4 340 aa22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 CTHRC1Q96CG8 243 aa22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 ERP27Q96DN0 273 aa22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 CENPHQ9H3R5 247 aa22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 MYNNQ9NPC7 610 aa22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 MIEF1Q9NQG6 463 aa22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 SLC35C2Q9NQQ7 365 aa22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 C1orf109Q9NX04 203 aa22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 BCAP29Q9UHQ4 241 aa22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 ZNF639Q9UID6 485 aa22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 CCL27Q9Y4X3 112 aa22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 POLR3HQ9Y535 204 aaPredicted RBP22.82■■□□□ 1.24
RAPGEF1-206ENST00000438647 DOPEY1Q5JWR5 2465 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 HS6ST1O60243 411 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 ERLIN1O75477 346 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 BCAS2O75934 225 aaPredicted RBP22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 WISP2O76076 250 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 CHRNGP07510 517 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 RNF224P0DH78 156 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 CCL3P10147 92 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 GP1BBP13224 206 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 MPIP34949 423 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 CA7P43166 264 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 ETV4P43268 484 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 MGAT2Q10469 447 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 FAM180BQ6P0A1 224 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 MTFR2Q6P444 385 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 FAM111BQ6SJ93 734 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 IKBIPQ70UQ0 350 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 SLC22A16Q86VW1 577 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 SPPL2CQ8IUH8 684 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 CCDC116Q8IYX3 515 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 FAM13CQ8NE31 585 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 ADCY4Q8NFM4 1077 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 ZNF675Q8TD23 568 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 PAQR8Q8TEZ7 354 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 ADIPOR1Q96A54 375 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 ZIM3Q96PE6 472 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 LRTM1Q9HBL6 345 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 SH2D2AQ9NP31 389 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 CNIH4Q9P003 139 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 SUCOQ9UBS9 1254 aaKnown RBP22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 PRODH2Q9UF12 536 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 TRAF6Q9Y4K3 522 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 DNAJC15Q9Y5T4 150 aa22.81■■□□□ 1.24
RAPGEF1-206ENST00000438647 DIDO1Q9BTC0 2240 aaKnown RBP22.8■■□□□ 1.24
RAPGEF1-206ENST00000438647 TP53I11O14683 189 aa22.8■■□□□ 1.24
RAPGEF1-206ENST00000438647 MYZAPP0CAP1 466 aa22.8■■□□□ 1.24
RAPGEF1-206ENST00000438647 ABOP16442 354 aa22.8■■□□□ 1.24
RAPGEF1-206ENST00000438647 DUSP2Q05923 314 aa22.8■■□□□ 1.24
RAPGEF1-206ENST00000438647 CEBPEQ15744 281 aa22.8■■□□□ 1.24
RAPGEF1-206ENST00000438647 NTRK2Q16620 822 aa22.8■■□□□ 1.24
RAPGEF1-206ENST00000438647 FAM71E1Q6IPT2 247 aa22.8■■□□□ 1.24
RAPGEF1-206ENST00000438647 PAOXQ6QHF9 649 aa22.8■■□□□ 1.24
RAPGEF1-206ENST00000438647 ZCCHC23Q6ZST2 131 aa22.8■■□□□ 1.24
RAPGEF1-206ENST00000438647 BBS4Q96RK4 519 aa22.8■■□□□ 1.24
RAPGEF1-206ENST00000438647 ZNF835Q9Y2P0 537 aa22.8■■□□□ 1.24
RAPGEF1-206ENST00000438647 NPFFR2Q9Y5X5 522 aa22.8■■□□□ 1.24
RAPGEF1-206ENST00000438647 G3V3Y1 287 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 TM9SF1O15321 606 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 GPX3P22352 226 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 PPIAP62937 165 aaKnown RBP22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 EXOSC7Q15024 291 aaKnown RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms