RNA–Protein interactions for RNA: ENST00000437607.1

PTPRF-208, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 788 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-208ENST00000437607 TAAR6Q96RI8 345 aa11.36□□□□□ -0.59
PTPRF-208ENST00000437607 LMF1Q96S06 567 aa11.36□□□□□ -0.59
PTPRF-208ENST00000437607 NPLQ9BXD5 320 aaPredicted RBP11.36□□□□□ -0.59
PTPRF-208ENST00000437607 REEP4Q9H6H4 257 aa11.36□□□□□ -0.59
PTPRF-208ENST00000437607 EPS8L2Q9H6S3 715 aa11.36□□□□□ -0.59
PTPRF-208ENST00000437607 ZNF160Q9HCG1 818 aa11.36□□□□□ -0.59
PTPRF-208ENST00000437607 LYRM4Q9HD34 91 aa11.36□□□□□ -0.59
PTPRF-208ENST00000437607 PRDM7Q9NQW5 492 aa11.36□□□□□ -0.59
PTPRF-208ENST00000437607 ARL8BQ9NVJ2 186 aa11.36□□□□□ -0.59
PTPRF-208ENST00000437607 TEX10Q9NXF1 929 aaPredicted RBP11.36□□□□□ -0.59
PTPRF-208ENST00000437607 NXT1Q9UKK6 140 aaKnown RBP11.36□□□□□ -0.59
PTPRF-208ENST00000437607 C2CD3Q4AC94 2353 aa11.36□□□□□ -0.59
PTPRF-208ENST00000437607 ZFHX3Q15911 3703 aa11.36□□□□□ -0.59
PTPRF-208ENST00000437607 IGLV3-12A0A075B6K2 115 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 H0YIG0 161 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 SGK494L7N484 410 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 MRASO14807 208 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 JRKO75564 520 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 AIFM1O95831 613 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 HPP00738 406 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 IL6P05231 212 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 ZGLP1P0C6A0 271 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 COX6A1P12074 109 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 CAPN3P20807 821 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 FBLP22087 321 aaKnown RBP11.35□□□□□ -0.59
PTPRF-208ENST00000437607 CPN2P22792 545 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 IL12AP29459 219 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 NTSP30990 170 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 TLX1P31314 330 aaPredicted RBP11.35□□□□□ -0.59
PTPRF-208ENST00000437607 S100A3P33764 101 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 SOX11P35716 441 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 KIR3DL1P43629 444 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 CPA2P48052 419 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 RAB38P57729 211 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 OLR1P78380 273 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 SRSF11Q05519 484 aaKnown RBP11.35□□□□□ -0.59
PTPRF-208ENST00000437607 C2orf80Q0P641 193 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 STX5Q13190 355 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 PGS1Q32NB8 556 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 VWA2Q5GFL6 755 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 SPANXN4Q5MJ08 99 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 NDUFAF5Q5TEU4 345 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 IRAK1BP1Q5VVH5 260 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 REP15Q6BDI9 236 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 OR52E8Q6IFG1 317 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 MRM1Q6IN84 353 aaKnown RBP11.35□□□□□ -0.59
PTPRF-208ENST00000437607 PRMT9Q6P2P2 845 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 FAM180AQ6UWF9 173 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 RIPOR1Q6ZS17 1223 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 MSANTD1Q6ZTZ1 278 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 GPR180Q86V85 440 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 LAPTM4BQ86VI4 370 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 PDSS2Q86YH6 399 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 BCORP1Q8N888 145 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 FAM47BQ8NA70 645 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 OR1N1Q8NGS0 311 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 TSPEARQ8WU66 669 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 RELTQ969Z4 430 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 MMABQ96EY8 250 aaPredicted RBP11.35□□□□□ -0.59
PTPRF-208ENST00000437607 NSL1Q96IY1 281 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 TEX37Q96LM6 180 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 CRB3Q9BUF7 120 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 RMND5AQ9H871 391 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 ZNF304Q9HCX3 659 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 GIMAP4Q9NUV9 329 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 OLAHQ9NV23 265 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.35□□□□□ -0.599e-7■□□□□ 11.2
PTPRF-208ENST00000437607 MS4A12Q9NXJ0 267 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 PLA2G3Q9NZ20 509 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 HCN3Q9P1Z3 774 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 LEF1Q9UJU2 399 aaPredicted RBP11.35□□□□□ -0.59
PTPRF-208ENST00000437607 CDC14AQ9UNH5 594 aa11.35□□□□□ -0.59
PTPRF-208ENST00000437607 MRPS33Q9Y291 106 aaKnown RBP11.35□□□□□ -0.59
PTPRF-208ENST00000437607 SETD2Q9BYW2 2564 aaPredicted RBP11.34□□□□□ -0.59
PTPRF-208ENST00000437607 LOC100653049A0A140TA62 436 aa11.34□□□□□ -0.59
PTPRF-208ENST00000437607 C1orf226A1L170 272 aa11.34□□□□□ -0.59
PTPRF-208ENST00000437607 PRSS44E7EML9 344 aa11.34□□□□□ -0.59
PTPRF-208ENST00000437607 PCDH17O14917 1159 aa11.34□□□□□ -0.59
PTPRF-208ENST00000437607 PDPK1O15530 556 aa11.34□□□□□ -0.59
PTPRF-208ENST00000437607 FOXS1O43638 330 aa11.34□□□□□ -0.59
PTPRF-208ENST00000437607 ATP5HO75947 161 aa11.34□□□□□ -0.59
PTPRF-208ENST00000437607 KRT34O76011 436 aa11.34□□□□□ -0.59
PTPRF-208ENST00000437607 UNC5CO95185 931 aa11.34□□□□□ -0.59
PTPRF-208ENST00000437607 PGRP06401 933 aa11.34□□□□□ -0.59
PTPRF-208ENST00000437607 CELA2AP08217 269 aa11.34□□□□□ -0.59
PTPRF-208ENST00000437607 RNH1P13489 461 aaKnown RBP11.34□□□□□ -0.59
PTPRF-208ENST00000437607 DRD2P14416 443 aa11.34□□□□□ -0.59
PTPRF-208ENST00000437607 ELAVL4P26378 380 aaKnown RBP11.34□□□□□ -0.59
PTPRF-208ENST00000437607 NUDT2P50583 147 aa11.34□□□□□ -0.59
PTPRF-208ENST00000437607 TNFSF10P50591 281 aa11.34□□□□□ -0.59
PTPRF-208ENST00000437607 EFNA3P52797 238 aa11.34□□□□□ -0.59
PTPRF-208ENST00000437607 LIM2P55344 173 aa11.34□□□□□ -0.59
PTPRF-208ENST00000437607 PDE7AQ13946 482 aa11.34□□□□□ -0.59
PTPRF-208ENST00000437607 CPTPQ5TA50 214 aa11.34□□□□□ -0.59
PTPRF-208ENST00000437607 BLOC1S3Q6QNY0 202 aa11.34□□□□□ -0.59
PTPRF-208ENST00000437607 CAMKMTQ7Z624 323 aa11.34□□□□□ -0.59
PTPRF-208ENST00000437607 FUNDC1Q8IVP5 155 aa11.34□□□□□ -0.59
PTPRF-208ENST00000437607 MCEMP1Q8IX19 187 aa11.34□□□□□ -0.59
PTPRF-208ENST00000437607 RIMKLAQ8IXN7 391 aa11.34□□□□□ -0.59
PTPRF-208ENST00000437607 PRSS58Q8IYP2 241 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms