RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 NINLQ9Y2I6 1382 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 SYNMO15061 1565 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 NWD1Q149M9 1564 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 DIP2CQ9Y2E4 1556 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 TROQ12816 1431 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 SETD5Q9C0A6 1442 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZNF142P52746 1687 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 PRXQ9BXM0 1461 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 IGHV4-30-2A0A087WSY4 118 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 A0A0A6YYD4 124 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 IQCMA0A1B0GVH7 501 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 E9PMD0 336 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 SGK494L7N484 410 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 INPP4BO15327 924 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 BUB1O43683 1085 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 STK17BO94768 372 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 TOXO94900 526 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 APBB3O95704 486 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 KRT6BP04259 564 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 PTMAP06454 111 aaKnown RBP2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 FOSL2P15408 326 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 GNSP15586 552 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 PRKACGP22612 351 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 PDHA2P29803 388 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 PRDX2P32119 198 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 MDH1P40925 334 aaKnown RBP2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 KRT6CP48668 564 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 NPY2RP49146 381 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 PGFP49763 221 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 GMFBP60983 142 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 CDKL1Q00532 357 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 DHODHQ02127 395 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 NFATC2Q13469 925 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 KIAA0141Q14154 515 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 FAM189A2Q15884 450 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 CCL14Q16627 93 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 KNOP1Q1ED39 458 aaKnown RBP2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 CMPK2Q5EBM0 449 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 DCAF12Q5T6F0 453 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 WLSQ5T9L3 541 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 IL23RQ5VWK5 629 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZNF613Q6PF04 617 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZNF730Q6ZMV8 503 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 TMEM26Q6ZUK4 368 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 PAQR9Q6ZVX9 377 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 CHMP1BQ7LBR1 199 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 PHC2Q8IXK0 858 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 LMNTD2Q8IXW0 634 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 CERS5Q8N5B7 392 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZNRF1Q8ND25 227 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 NUP37Q8NFH4 326 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 RDH11Q8TC12 318 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 TCP11Q8WWU5 503 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 GTF3AQ92664 365 aaKnown RBP2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 NABP1Q96AH0 204 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 SLC25A36Q96CQ1 311 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 COG3Q96JB2 828 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 PRICKLE1Q96MT3 831 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 NDUFAF3Q9BU61 184 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 WRAP53Q9BUR4 548 aaKnown RBP2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 RAB11FIP5Q9BXF6 653 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 RAB17Q9H0T7 212 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 ABCG4Q9H172 646 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 TMEM231Q9H6L2 316 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 NMUR1Q9HB89 426 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 NLGN3Q9NZ94 848 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 CLIP2Q9UDT6 1046 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 BLOC1S6Q9UL45 172 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 ISY1Q9ULR0 285 aaKnown RBP2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 PLA2G4CQ9UP65 541 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZNF175Q9Y473 711 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 U3KQV3 271 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 SIGLEC1Q9BZZ2 1709 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 ATP8B3O60423 1300 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 KIF7Q2M1P5 1343 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 NEURL4Q96JN8 1562 aa2.61□□□□□ -1.99
HMGB1P27-201ENST00000431429 LRP6O75581 1613 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 MYO3AQ8NEV4 1616 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 TDRD15B5MCY1 1934 aaKnown RBP2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 SETD1AO15047 1707 aaKnown RBP2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 PRDM15P57071 1507 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 A0A1B0GWJ7 208 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 ARHGEF33A8MVX0 844 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 MEI4A8MW99 385 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 PDXKO00764 312 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 SOCS3O14543 225 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 SH2D1BO14796 132 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 ANXA9O76027 345 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 AKR7A3O95154 331 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 PROS1P07225 676 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 HEXBP07686 556 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 RALAP11233 206 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 HOXB6P17509 224 aaKnown RBP2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 DESP17661 470 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 PTPN6P29350 595 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 PKLRP30613 574 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 HPDP32754 393 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 TRIM23P36406 574 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 ACADSBP45954 432 aa2.6□□□□□ -1.99
HMGB1P27-201ENST00000431429 SGSHP51688 502 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms