RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 FBXL21Q9UKT6 434 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 CHST2Q9Y4C5 530 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 BTBD17A6NE02 478 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 A8MVJ9 347 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 F5H423 210 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 CACNB4O00305 520 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 HNRNPDLO14979 420 aaKnown RBP8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 TOX3O15405 576 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 OIP5O43482 229 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 MPZL2O60487 215 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 AKR7A3O95154 331 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 LATS1O95835 1130 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 VTNP04004 478 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 GIPP09681 153 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 UQCRC2P22695 453 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 MST1P26927 711 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 MAPK3P27361 379 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 RAP2BP61225 183 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 NUTF2P61970 127 aaKnown RBP8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 SP4Q02446 784 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 CCDC85BQ15834 202 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 SLC14A2Q15849 920 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 UGT8Q16880 541 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 XKR7Q5GH72 579 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 FAM102AQ5T9C2 384 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 ATG9BQ674R7 924 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 GSG1LQ6UXU4 331 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 TMUB2Q71RG4 321 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 DPH6Q7L8W6 267 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 TGIF2LXQ8IUE1 241 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 DCUN1D3Q8IWE4 304 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 CMIPQ8IY22 773 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 SPICQ8N5J4 248 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 PCSK9Q8NBP7 692 aaKnown RBP8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 GPR26Q8NDV2 337 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 OR10J5Q8NHC4 309 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 KIF12Q96FN5 646 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 LRR1Q96L50 414 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 PGLYRP2Q96PD5 576 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 MYOCQ99972 504 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 BARX1Q9HBU1 254 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 MYOZ1Q9NP98 299 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 EXOSC3Q9NQT5 275 aaKnown RBP8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 GFOD1Q9NXC2 390 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 VAPAQ9P0L0 249 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 DHCR7Q9UBM7 475 aaKnown RBP8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 MBD1Q9UIS9 605 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 POLR3HQ9Y535 204 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 STYXL1Q9Y6J8 313 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 LTBP3Q9NS15 1303 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 FAM86C2PA6NEL3 165 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 COLCA2A8K830 154 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 SLC28A2O43868 658 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 SEMA7AO75326 666 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 ATXN1LP0C7T5 689 aaKnown RBP8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 RD3LP0DJH9 198 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 SLC2A1P11166 492 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 ZNF44P15621 663 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 AGAP20933 346 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 PMELP40967 661 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 SOX3P41225 446 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 CSNK1EP49674 416 aaKnown RBP8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 SELENOPP49908 381 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 FOXA1P55317 472 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 CD81P60033 236 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 ELAVL2Q12926 359 aaKnown RBP8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 MAD2L1Q13257 205 aaPredicted RBP8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 DOC2BQ14184 412 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 MBTPS1Q14703 1052 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 MANEAQ5SRI9 462 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 ZNF660Q6AZW8 331 aaPredicted RBP8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 RAET1GQ6H3X3 334 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 LIN54Q6MZP7 749 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 CALHM3Q86XJ0 350 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 ZNF567Q8N184 647 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 TRMT10AQ8TBZ6 339 aaKnown RBP8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 NETO1Q8TDF5 533 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 DTD1Q8TEA8 209 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 CDCA3Q99618 268 aaPredicted RBP8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 POLR3FQ9H1D9 316 aaPredicted RBP8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 OPN3Q9H1Y3 402 aaPredicted RBP8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 REEP1Q9H902 201 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 FKBPLQ9UIM3 349 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 CHTOPQ9Y3Y2 248 aaKnown RBP8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 MGAMO43451 1857 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 C5orf58C9J3I9 102 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 STK25O00506 426 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 SUSD5O60279 629 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 PRAF2O60831 178 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 MED6O75586 246 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 PTBP3O95758 552 aaKnown RBP8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 GLP2RO95838 553 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 TFP02787 698 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 SYPP08247 313 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 GAAP10253 952 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 AHCYP23526 432 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 NMBRP28336 390 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 SLC6A4P31645 630 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 CRATP43155 626 aa8.42□□□□□ -1.06
CDC42BPA-206ENST00000429440 SEC61A1P61619 476 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms