RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 ANXA8L1Q5VT79 327 aa15.82■□□□□ 0.12
COL7A1-202ENST00000422991 KBTBD2Q8IY47 623 aa15.82■□□□□ 0.12
COL7A1-202ENST00000422991 KIF2BQ8N4N8 673 aa15.82■□□□□ 0.12
COL7A1-202ENST00000422991 ELP5Q8TE02 316 aa15.82■□□□□ 0.12
COL7A1-202ENST00000422991 OR5P2Q8WZ92 322 aa15.82■□□□□ 0.12
COL7A1-202ENST00000422991 KAT2AQ92830 837 aa15.82■□□□□ 0.12
COL7A1-202ENST00000422991 ERP27Q96DN0 273 aa15.82■□□□□ 0.12
COL7A1-202ENST00000422991 UBL7Q96S82 380 aaPredicted RBP15.82■□□□□ 0.12
COL7A1-202ENST00000422991 NUDT9Q9BW91 350 aa15.82■□□□□ 0.12
COL7A1-202ENST00000422991 NMUR2Q9GZQ4 415 aa15.82■□□□□ 0.12
COL7A1-202ENST00000422991 COPS7AQ9UBW8 275 aa15.82■□□□□ 0.12
COL7A1-202ENST00000422991 C6orf47O95873 294 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 IL6P05231 212 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 ITGAMP11215 1152 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 SSTR4P31391 388 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 MC3RP41968 323 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 CDK9P50750 372 aaKnown RBP15.81■□□□□ 0.12
COL7A1-202ENST00000422991 SLC37A1P57057 533 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 SOX8P57073 446 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 AP2B1P63010 937 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 ATMQ13315 3056 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 UBAP2LQ14157 1087 aaKnown RBP15.81■□□□□ 0.12
COL7A1-202ENST00000422991 TIGD2Q4W5G0 525 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 TRMT12Q53H54 448 aaKnown RBP15.81■□□□□ 0.12
COL7A1-202ENST00000422991 FHL5Q5TD97 284 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 BORAQ6PGQ7 559 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 BLOC1S3Q6QNY0 202 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 TMEM107Q6UX40 140 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 MSANTD1Q6ZTZ1 278 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 CPAMD8Q8IZJ3 1885 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 CLECL1Q8IZS7 167 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 GALNT16Q8N428 558 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 OR7G2Q8NG99 324 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 OR7G1Q8NGA0 311 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 PSMA8Q8TAA3 256 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 APOBEC4Q8WW27 367 aaKnown RBP15.81■□□□□ 0.12
COL7A1-202ENST00000422991 OR52E6Q96RD3 313 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 NEUROD4Q9HD90 331 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 SIRT3Q9NTG7 399 aaPredicted RBP15.81■□□□□ 0.12
COL7A1-202ENST00000422991 CCDC167Q9P0B6 97 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 ARL2BPQ9Y2Y0 163 aa15.81■□□□□ 0.12
COL7A1-202ENST00000422991 A0A087WV62 115 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 TRBV11-1A0A0K0K1C0 115 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 PRSS51A0A1B0GVH4 220 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 PLOD2O00469 737 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 NR5A2O00482 541 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 FCHO1O14526 889 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 PLOD3O60568 738 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 DNAJB5O75953 348 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 CBX7O95931 251 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 ITGB2P05107 769 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 CD1EP15812 388 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 ITGA3P26006 1051 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 GPC1P35052 558 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 CLCN2P51788 898 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 KCNK10P57789 538 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 DUSP8Q13202 625 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 EXOSC7Q15024 291 aaKnown RBP15.8■□□□□ 0.12
COL7A1-202ENST00000422991 TBR1Q16650 682 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 SOWAHCQ53LP3 525 aaPredicted RBP15.8■□□□□ 0.12
COL7A1-202ENST00000422991 JMJD6Q6NYC1 403 aaPredicted RBP15.8■□□□□ 0.12
COL7A1-202ENST00000422991 RNF111Q6ZNA4 994 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 GK5Q6ZS86 529 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 ANKRD46Q86W74 232 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 ZNF615Q8N8J6 731 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 SIMC1Q8NDZ2 872 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 VPS33AQ96AX1 596 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 ELP4Q96EB1 424 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 THOC3Q96J01 351 aaKnown RBP15.8■□□□□ 0.12
COL7A1-202ENST00000422991 CCDC115Q96NT0 180 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 TRIM4Q9C037 500 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 LHPPQ9H008 270 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 SLC52A3Q9NQ40 469 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.8■□□□□ 0.12
COL7A1-202ENST00000422991 PTGFRNQ9P2B2 879 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 BTNL2Q9UIR0 455 aa15.8■□□□□ 0.12
COL7A1-202ENST00000422991 ASPDHA6ND91 283 aa15.79■□□□□ 0.12
COL7A1-202ENST00000422991 SLC22A2O15244 555 aa15.79■□□□□ 0.12
COL7A1-202ENST00000422991 CFLARO15519 480 aa15.79■□□□□ 0.12
COL7A1-202ENST00000422991 CCDC22O60826 627 aa15.79■□□□□ 0.12
COL7A1-202ENST00000422991 CEACAM4O75871 244 aa15.79■□□□□ 0.12
COL7A1-202ENST00000422991 CAPN3P20807 821 aa15.79■□□□□ 0.12
COL7A1-202ENST00000422991 ADSLP30566 484 aaPredicted RBP15.79■□□□□ 0.12
COL7A1-202ENST00000422991 HBA1P69905 142 aa15.79■□□□□ 0.12
COL7A1-202ENST00000422991 LRRC74AQ0VAA2 488 aa15.79■□□□□ 0.12
COL7A1-202ENST00000422991 KLF10Q13118 480 aa15.79■□□□□ 0.12
COL7A1-202ENST00000422991 GKAP1Q5VSY0 366 aaPredicted RBP15.79■□□□□ 0.12
COL7A1-202ENST00000422991 HSDL2Q6YN16 418 aa15.79■□□□□ 0.12
COL7A1-202ENST00000422991 MTDHQ86UE4 582 aaKnown RBP15.79■□□□□ 0.12
COL7A1-202ENST00000422991 C9orf40Q8IXQ3 194 aa15.79■□□□□ 0.12
COL7A1-202ENST00000422991 OR2L13Q8N349 312 aa15.79■□□□□ 0.12
COL7A1-202ENST00000422991 VPS37AQ8NEZ2 397 aa15.79■□□□□ 0.12
COL7A1-202ENST00000422991 OR8K3Q8NH51 312 aa15.79■□□□□ 0.12
COL7A1-202ENST00000422991 BRIX1Q8TDN6 353 aaKnown RBP15.79■□□□□ 0.12
COL7A1-202ENST00000422991 PSMF1Q92530 271 aa15.79■□□□□ 0.12
COL7A1-202ENST00000422991 SPDL1Q96EA4 605 aa15.79■□□□□ 0.12
COL7A1-202ENST00000422991 MYLK2Q9H1R3 596 aa15.79■□□□□ 0.12
COL7A1-202ENST00000422991 OR10A5Q9H207 317 aa15.79■□□□□ 0.12
COL7A1-202ENST00000422991 CXorf36Q9H7Y0 433 aa15.79■□□□□ 0.12
COL7A1-202ENST00000422991 ANKRA2Q9H9E1 313 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms