RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 HLA-DQA1Q5Y7H0 255 aa8.99□□□□□ -0.97
HERC3-204ENST00000422770 TMEM198Q66K66 360 aa8.99□□□□□ -0.97
HERC3-204ENST00000422770 SPINK14Q6IE38 97 aa8.99□□□□□ -0.97
HERC3-204ENST00000422770 EPGNQ6UW88 154 aa8.99□□□□□ -0.97
HERC3-204ENST00000422770 GALNT12Q8IXK2 581 aa8.99□□□□□ -0.97
HERC3-204ENST00000422770 CYP4Z2PQ8N1L4 340 aa8.99□□□□□ -0.97
HERC3-204ENST00000422770 ANKS4BQ8N8V4 417 aa8.99□□□□□ -0.97
HERC3-204ENST00000422770 FNDC5Q8NAU1 212 aa8.99□□□□□ -0.97
HERC3-204ENST00000422770 TMEM178AQ8NBL3 297 aa8.99□□□□□ -0.97
HERC3-204ENST00000422770 FAM98AQ8NCA5 519 aaKnown RBP8.99□□□□□ -0.97
HERC3-204ENST00000422770 C16orf78Q8WTQ4 265 aa8.99□□□□□ -0.97
HERC3-204ENST00000422770 MIB2Q96AX9 1013 aa8.99□□□□□ -0.97
HERC3-204ENST00000422770 TM4SF18Q96CE8 201 aa8.99□□□□□ -0.97
HERC3-204ENST00000422770 SENP5Q96HI0 755 aaPredicted RBP8.99□□□□□ -0.97
HERC3-204ENST00000422770 CCDC28BQ9BUN5 200 aa8.99□□□□□ -0.97
HERC3-204ENST00000422770 CLMPQ9H6B4 373 aa8.99□□□□□ -0.97
HERC3-204ENST00000422770 LRTM1Q9HBL6 345 aa8.99□□□□□ -0.97
HERC3-204ENST00000422770 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.99□□□□□ -0.97
HERC3-204ENST00000422770 HPF1Q9NWY4 346 aa8.99□□□□□ -0.97
HERC3-204ENST00000422770 BCAP29Q9UHQ4 241 aa8.99□□□□□ -0.97
HERC3-204ENST00000422770 UTS2RQ9UKP6 389 aa8.99□□□□□ -0.97
HERC3-204ENST00000422770 PSME2Q9UL46 239 aa8.99□□□□□ -0.97
HERC3-204ENST00000422770 ENTPD4Q9Y227 616 aa8.99□□□□□ -0.97
HERC3-204ENST00000422770 NTNG1Q9Y2I2 539 aa8.99□□□□□ -0.97
HERC3-204ENST00000422770 PCDHA9Q9Y5H5 950 aa8.99□□□□□ -0.97
HERC3-204ENST00000422770 TLN1Q9Y490 2541 aaKnown RBP8.99□□□□□ -0.97
HERC3-204ENST00000422770 ASH1LQ9NR48 2969 aaKnown RBP8.99□□□□□ -0.97
HERC3-204ENST00000422770 CNTRLQ7Z7A1 2325 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 HRKO00198 91 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 LSM1O15116 133 aaKnown RBP8.98□□□□□ -0.97
HERC3-204ENST00000422770 RSL1D1O76021 490 aaKnown RBP8.98□□□□□ -0.97
HERC3-204ENST00000422770 DDAH2O95865 285 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 SLC35E2P0CK97 266 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 LBPP18428 481 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 CSNK2A2P19784 350 aaPredicted RBP8.98□□□□□ -0.97
HERC3-204ENST00000422770 NCF2P19878 526 aaPredicted RBP8.98□□□□□ -0.97
HERC3-204ENST00000422770 SSTR4P31391 388 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 SOX3P41225 446 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 HLCSP50747 726 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 TRA2BP62995 288 aaKnown RBP8.98□□□□□ -0.97
HERC3-204ENST00000422770 RNF4P78317 190 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 RAE1P78406 368 aaKnown RBP8.98□□□□□ -0.97
HERC3-204ENST00000422770 C2orf80Q0P641 193 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 MRPL49Q13405 166 aaKnown RBP8.98□□□□□ -0.97
HERC3-204ENST00000422770 HEPACAMQ14CZ8 416 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 LSM12Q3MHD2 195 aaKnown RBP8.98□□□□□ -0.97
HERC3-204ENST00000422770 ZNF468Q5VIY5 522 aaPredicted RBP8.98□□□□□ -0.97
HERC3-204ENST00000422770 SLC48A1Q6P1K1 146 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 IL20RBQ6UXL0 311 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 RNF165Q6ZSG1 346 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 GALNTL5Q7Z4T8 443 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 PIGWQ7Z7B1 504 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 LGI4Q8N135 537 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 BCORP1Q8N888 145 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 ADCY4Q8NFM4 1077 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 OR5L2Q8NGL0 311 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 ACTRT2Q8TDY3 377 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 ZNF721Q8TF20 911 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 GFM2Q969S9 779 aaKnown RBP8.98□□□□□ -0.97
HERC3-204ENST00000422770 FBXL20Q96IG2 436 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 PPP3R2Q96LZ3 170 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 BBS4Q96RK4 519 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 TSPAN10Q9H1Z9 355 aaPredicted RBP8.98□□□□□ -0.97
HERC3-204ENST00000422770 AKTIPQ9H8T0 292 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 OLAHQ9NV23 265 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 C1orf109Q9NX04 203 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 HEY2Q9UBP5 337 aa8.98□□□□□ -0.97
HERC3-204ENST00000422770 YARS2Q9Y2Z4 477 aaKnown RBP8.98□□□□□ -0.97
HERC3-204ENST00000422770 SPTA1P02549 2419 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 EXPH5Q8NEV8 1989 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 G3V3Y1 287 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 UBDO15205 165 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 AKAP10O43572 662 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 DCTN3O75935 186 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 LRATO95237 230 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 CRYABP02511 175 aaKnown RBP8.97□□□□□ -0.97
HERC3-204ENST00000422770 SP1P08047 785 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 ALDOCP09972 364 aaKnown RBP8.97□□□□□ -0.97
HERC3-204ENST00000422770 CT62P0C5K7 136 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 DRD2P14416 443 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 MAPK1P28482 360 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 NTSP30990 170 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 NME5P56597 212 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 GPR85P60893 370 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 UBAP2LQ14157 1087 aaKnown RBP8.97□□□□□ -0.97
HERC3-204ENST00000422770 EXOSC7Q15024 291 aaKnown RBP8.97□□□□□ -0.97
HERC3-204ENST00000422770 LTB4RQ15722 352 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 SLC25A25Q6KCM7 469 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 TRIM46Q7Z4K8 759 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 C9orf40Q8IXQ3 194 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 LRRC25Q8N386 305 aaPredicted RBP8.97□□□□□ -0.97
HERC3-204ENST00000422770 VWA5B2Q8N398 1253 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 GALNT11Q8NCW6 608 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 MDS2Q8NDY4 140 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 FAM13CQ8NE31 585 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 CEP70Q8NHQ1 597 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 CLHC1Q8NHS4 586 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 PRR7Q8TB68 274 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 SLC22A8Q8TCC7 542 aa8.97□□□□□ -0.97
HERC3-204ENST00000422770 STON2Q8WXE9 905 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms