RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 GXYLT2A0PJZ3 443 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 ACOX3O15254 700 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 KCNK5O95279 499 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 SHC2P98077 582 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 MRPL49Q13405 166 aaKnown RBP11.37□□□□□ -0.59
PTPRF-205ENST00000414879 ZNF595Q8IYB9 648 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 METTL4Q8N3J2 472 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 ACOT4Q8N9L9 421 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 TMEM19Q96HH6 336 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 PHF12Q96QT6 1004 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 SLC22A12Q96S37 553 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 FTSJ1Q9UET6 329 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 METTL21EPA6NDL7 271 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 HTR1AP08908 422 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 NDUFV2P19404 249 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 SOX9P48436 509 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 CCR5P51681 352 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 RACK1P63244 317 aaKnown RBP11.37□□□□□ -0.59
PTPRF-205ENST00000414879 CES4AQ5XG92 561 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 UBALD2Q8IYN6 164 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 TRIM43Q96BQ3 446 aaPredicted RBP11.37□□□□□ -0.59
PTPRF-205ENST00000414879 BCL7BQ9BQE9 202 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 PCED1AQ9H1Q7 454 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 CXCL16Q9H2A7 254 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 LDAHQ9H6V9 325 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 TMEM181Q9P2C4 612 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 STOML2Q9UJZ1 356 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 HTR3EA5X5Y0 456 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 CHRM5P08912 532 aaPredicted RBP11.37□□□□□ -0.59
PTPRF-205ENST00000414879 HIST1H1TP22492 207 aaPredicted RBP11.37□□□□□ -0.59
PTPRF-205ENST00000414879 PAX7P23759 505 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 EIF2B2P49770 351 aaKnown RBP11.37□□□□□ -0.59
PTPRF-205ENST00000414879 ACTA2P62736 377 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 ACTG2P63267 376 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 RUNDC3AQ59EK9 446 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 YOD1Q5VVQ6 348 aaPredicted RBP11.37□□□□□ -0.59
PTPRF-205ENST00000414879 CCSAPQ6IQ19 270 aaPredicted RBP11.37□□□□□ -0.59
PTPRF-205ENST00000414879 FIP1L1Q6UN15 594 aaKnown RBP11.37□□□□□ -0.59
PTPRF-205ENST00000414879 MAMDC2Q7Z304 686 aaPredicted RBP11.37□□□□□ -0.59
PTPRF-205ENST00000414879 TMEM17Q86X19 198 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 TMEM151BQ8IW70 566 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 YIPF7Q8N8F6 280 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 HHIPQ96QV1 700 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 MCUBQ9NWR8 336 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 TAAR2Q9P1P5 351 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 SIT1Q9Y3P8 196 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 DPPA5A6NC42 116 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 GRXCR1A8MXD5 290 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 ACOT7O00154 380 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 KHNYNO15037 678 aaKnown RBP11.37□□□□□ -0.59
PTPRF-205ENST00000414879 GMFGO60234 142 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 STATHP02808 62 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 ETS2P15036 469 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 GADD45AP24522 165 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 EDNRAP25101 427 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 CD27P26842 260 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 GCAP28676 217 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 MAGEA12P43365 314 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 HTR3AP46098 478 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 AFF3P51826 1226 aaKnown RBP11.37□□□□□ -0.59
PTPRF-205ENST00000414879 SLC25A24Q6NUK1 477 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 TSPYL5Q86VY4 417 aaPredicted RBP11.37□□□□□ -0.59
PTPRF-205ENST00000414879 HSPA12BQ96MM6 686 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 PDCD10Q9BUL8 212 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 CLMPQ9H6B4 373 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 NXT1Q9UKK6 140 aaKnown RBP11.37□□□□□ -0.59
PTPRF-205ENST00000414879 MMP17Q9ULZ9 603 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 PCDHA9Q9Y5H5 950 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 CDH10Q9Y6N8 788 aa11.37□□□□□ -0.59
PTPRF-205ENST00000414879 P04436 131 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 CR2P20023 1033 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 SELENOWP63302 87 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 ID2Q02363 134 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 PLP2Q04941 152 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 FAM182AQ5T1J6 154 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 OGFRL1Q5TC84 451 aaPredicted RBP11.36□□□□□ -0.59
PTPRF-205ENST00000414879 Q6ZNB5 142 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 SLITRK4Q8IW52 837 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 IRF2BPLQ9H1B7 796 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 ASIC5Q9NY37 505 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 CCL26Q9Y258 94 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 PRSS21Q9Y6M0 314 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 ANHXE9PGG2 379 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 AQP9O43315 295 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 RNF13O43567 381 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 DENRO43583 198 aaKnown RBP11.36□□□□□ -0.59
PTPRF-205ENST00000414879 INMTO95050 263 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 VLDLRP98155 873 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 ACPTQ9BZG2 426 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 PDFQ9HBH1 243 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 FER1L6Q2WGJ9 1857 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 GNB5O14775 395 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 OR2T1O43869 369 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 TRAPPC6AO75865 159 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 PABPC4LP0CB38 370 aaKnown RBP11.36□□□□□ -0.59
PTPRF-205ENST00000414879 PRPS1P60891 318 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 PPP2R2BQ00005 443 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 KCNAB2Q13303 367 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 FBXO42Q6P3S6 717 aa11.36□□□□□ -0.59
PTPRF-205ENST00000414879 HSDL2Q6YN16 418 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms