RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 NSD2O96028 1365 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 SALL1Q9NSC2 1324 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 SLIT3O75094 1523 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 PKD1L3Q7Z443 1732 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 TNKS1BP1Q9C0C2 1729 aaKnown RBP3□□□□□ -1.93
HMGB1P11-201ENST00000413899 PARP4Q9UKK3 1724 aaKnown RBP3□□□□□ -1.93
HMGB1P11-201ENST00000413899 LOC390937A0A1W2PQ73 354 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 BCL2L11O43521 198 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 KIAA0513O60268 411 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 SRSF10O75494 262 aaKnown RBP3□□□□□ -1.93
HMGB1P11-201ENST00000413899 STBD1O95210 358 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 OR6A2O95222 327 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 GAS8O95995 478 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 RENP00797 406 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 CPA3P15088 417 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 BCL3P20749 454 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 GPX3P22352 226 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 PPP2R1AP30153 589 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 ZFP36L1Q07352 338 aaKnown RBP3□□□□□ -1.93
HMGB1P11-201ENST00000413899 MSLNQ13421 630 aaPredicted RBP3□□□□□ -1.93
HMGB1P11-201ENST00000413899 GIT2Q14161 759 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 ZNF730Q6ZMV8 503 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 NUFIP2Q7Z417 695 aaKnown RBP3□□□□□ -1.93
HMGB1P11-201ENST00000413899 P2RY8Q86VZ1 359 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 MARCH9Q86YJ5 346 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 ZNF781Q8N8C0 355 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 ZNRF1Q8ND25 227 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 LPCAT1Q8NF37 534 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 TCP11Q8WWU5 503 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 FAM46BQ96A09 425 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 PCED1BQ96HM7 432 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 CDHR1Q96JP9 859 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 ANKRD27Q96NW4 1050 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 SPAG8Q99932 426 aaPredicted RBP3□□□□□ -1.93
HMGB1P11-201ENST00000413899 AGPAT1Q99943 283 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 DDX50Q9BQ39 737 aaKnown RBP3□□□□□ -1.93
HMGB1P11-201ENST00000413899 NTMT1Q9BV86 223 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 RBM24Q9BX46 236 aaKnown RBP3□□□□□ -1.93
HMGB1P11-201ENST00000413899 LRRCC1Q9C099 1032 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 WWP1Q9H0M0 922 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 SP140LQ9H930 580 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 FBXW2Q9UKT8 454 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 SMAD5-AS1Q9Y6J3 95 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 STYXL1Q9Y6J8 313 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 C5P01031 1676 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 EDC4Q6P2E9 1401 aaKnown RBP3□□□□□ -1.93
HMGB1P11-201ENST00000413899 NHSL1Q5SYE7 1610 aa3□□□□□ -1.93
HMGB1P11-201ENST00000413899 SMIM30A4D0T7 59 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 RPL37AP8A6NKH3 93 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 TMCO5BA8MYB1 307 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 CSO75390 466 aaKnown RBP2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 SEMA4FO95754 770 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 MMP10P09238 476 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 NUDT17P0C025 328 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 LIMK2P53671 638 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 PEX3P56589 373 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 NME5P56597 212 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 GK2Q14410 553 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 HEPACAMQ14CZ8 416 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 ODF2Q5BJF6 829 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 VWA2Q5GFL6 755 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 AGAP7PQ5VUJ5 663 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 EMBQ6PCB8 327 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 CCDC91Q7Z6B0 441 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 ITIH5Q86UX2 942 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 LRRC49Q8IUZ0 686 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 RNASE8Q8TDE3 154 aaKnown RBP2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 UBTD2Q8WUN7 234 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 MRPL24Q96A35 216 aaKnown RBP2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 HSD17B14Q9BPX1 270 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 DCTN5Q9BTE1 182 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 MRPL9Q9BYD2 267 aaKnown RBP2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 RPS10P5Q9NQ39 176 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 DNAJC11Q9NVH1 559 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 TECRQ9NZ01 308 aaKnown RBP2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 EXOC7Q9UPT5 735 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 NUDCQ9Y266 331 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 MRPL11Q9Y3B7 192 aaKnown RBP2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 PAPPAQ13219 1627 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 PPIP5K1Q6PFW1 1433 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 LAMB4A4D0S4 1761 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 SCN11AQ9UI33 1791 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 PNPLA6Q8IY17 1366 aa2.99□□□□□ -1.93
HMGB1P11-201ENST00000413899 PLCH1Q4KWH8 1693 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 A0A1B0GVY2 172 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 A0A1W2PRV1 198 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 NEDD8-MDP1E9PL57 170 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 PSMD3O43242 534 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 GOSR1O95249 250 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 TXNDC12O95881 172 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 FOSL2P15408 326 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 FCARP24071 287 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 STIP1P31948 543 aaKnown RBP2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 SPRP35270 261 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 SLC12A3P55017 1021 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 UCP2P55851 309 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 RPL27P61353 136 aaKnown RBP2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 C17orf67Q0P5P2 114 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 SLC17A1Q14916 467 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 ZNF239Q16600 458 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms