RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 C3orf14Q9HBI5 128 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 MBNL1Q9NR56 388 aaKnown RBP9.29□□□□□ -0.92
MSH2-202ENST00000406134 ZSCAN32Q9NX65 697 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 EHD3Q9NZN3 535 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 SERGEFQ9UGK8 458 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 CES1P1Q9UKY3 287 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 MGAT4BQ9UQ53 548 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 A0A0G2JN53 185 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 MAN2B1O00754 1011 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 NDUFS4O43181 175 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 FGF19O95750 216 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 KELP23276 732 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 NR4A2P43354 598 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 MANFP55145 182 aaKnown RBP9.29□□□□□ -0.92
MSH2-202ENST00000406134 NCF4Q15080 339 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 TMEM53Q6P2H8 277 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 SLC44A2Q8IWA5 706 aaPredicted RBP9.29□□□□□ -0.92
MSH2-202ENST00000406134 FAM26EQ8N5C1 309 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 ZNF582Q96NG8 517 aaPredicted RBP9.29□□□□□ -0.92
MSH2-202ENST00000406134 CNPPD1Q9BV87 410 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 TSSK6Q9BXA6 273 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 ASPNQ9BXN1 380 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 NEUROD4Q9HD90 331 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 CLN6Q9NWW5 311 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 ZNF229Q9UJW7 825 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 LIPT1Q9Y234 373 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 INSL6Q9Y581 213 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 PEX16Q9Y5Y5 336 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 TICRRQ7Z2Z1 1910 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 LRIT2A6NDA9 550 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 ANKDD1BA6NHY2 528 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 ZNF197O14709 1029 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 KDM1AO60341 852 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 IFNA14P01570 189 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 STATHP02808 62 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 H1F0P07305 194 aaKnown RBP9.29□□□□□ -0.92
MSH2-202ENST00000406134 CLEC2LP0C7M8 214 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 POU1F1P28069 291 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 IL12RB1P42701 662 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 XKP51811 444 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 RPA4Q13156 261 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 ELAVL3Q14576 367 aaKnown RBP9.29□□□□□ -0.92
MSH2-202ENST00000406134 ARHGAP19Q14CB8 494 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 WSCD2Q2TBF2 565 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 ARHGAP15Q53QZ3 475 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 MEDAGQ5VYS4 303 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 C1orf94Q6P1W5 598 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 DEF8Q6ZN54 512 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 TCEANCQ8N8B7 351 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 OR2A1Q8NGT9 310 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 OR6F1Q8NGZ6 308 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 ZG16BQ96DA0 208 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 TMEM80Q96HE8 168 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 ZCCHC2Q9C0B9 1178 aaKnown RBP9.29□□□□□ -0.92
MSH2-202ENST00000406134 NT5DC2Q9H857 520 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 SLC6A20Q9NP91 592 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 ACSS1Q9NUB1 689 aaPredicted RBP9.29□□□□□ -0.92
MSH2-202ENST00000406134 MRPS18AQ9NVS2 196 aaKnown RBP9.29□□□□□ -0.92
MSH2-202ENST00000406134 FBXW2Q9UKT8 454 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 RABL2BQ9UNT1 228 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 CARD8Q9Y2G2 431 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 ASB4Q9Y574 426 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 WDFY3Q8IZQ1 3526 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 EDDM13A0A1B0GTR0 161 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 SEC14L5O43304 696 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 FCARP24071 287 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 NNMTP40261 264 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 BCL6P41182 706 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 ALDH9A1P49189 494 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 BNC1Q01954 994 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 SPHARQ15513 63 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 ENTPD8Q5MY95 495 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 MRM1Q6IN84 353 aaKnown RBP9.28□□□□□ -0.92
MSH2-202ENST00000406134 WFIKKN2Q8TEU8 576 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 RAD51AP1Q96B01 352 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 CNRIP1Q96F85 164 aaPredicted RBP9.28□□□□□ -0.92
MSH2-202ENST00000406134 PPP1R16AQ96I34 528 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 ZNF514Q96K75 400 aaPredicted RBP9.28□□□□□ -0.92
MSH2-202ENST00000406134 DPH7Q9BTV6 452 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 POLDIP3Q9BY77 421 aaKnown RBP9.28□□□□□ -0.92
MSH2-202ENST00000406134 KLHL25Q9H0H3 589 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 ANKRA2Q9H9E1 313 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 CFL2Q9Y281 166 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 ATG2BQ96BY7 2078 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 SHISA3A0PJX4 238 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 PGRMC2O15173 223 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 NME6O75414 186 aaPredicted RBP9.28□□□□□ -0.92
MSH2-202ENST00000406134 LGI1O95970 557 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 LALBAP00709 142 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 CPEP16870 476 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 ALOX12P18054 663 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 CCT3P49368 545 aaKnown RBP9.28□□□□□ -0.92
MSH2-202ENST00000406134 DCST1Q5T197 706 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 AGBL4Q5VU57 503 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 NRARPQ7Z6K4 114 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 MMAAQ8IVH4 418 aaKnown RBP9.28□□□□□ -0.92
MSH2-202ENST00000406134 UBE2E3Q969T4 207 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 GIMAP5Q96F15 307 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 MSLNLQ96KJ4 702 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms