RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 SLC29A4Q7RTT9 530 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 GPALPP1Q8IXQ4 340 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 SLC15A4Q8N697 577 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 GLB1L3Q8NCI6 653 aaPredicted RBP16.41■□□□□ 0.22
CTNS-203ENST00000399306 OR8J2Q8NGG1 315 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 CLHC1Q8NHS4 586 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 NPAS2Q99743 824 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 DPY30Q9C005 99 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 OR10A5Q9H207 317 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 GLIPR2Q9H4G4 154 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 TCF7L2Q9NQB0 619 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 TMEM45AQ9NWC5 275 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 SH3BP4Q9P0V3 963 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 MYOTQ9UBF9 498 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 PRODH2Q9UF12 536 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 PCDHGB6Q9Y5F9 930 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 GPR45Q9Y5Y3 372 aa16.41■□□□□ 0.22
CTNS-203ENST00000399306 GOLGA8QA0A0J9YX86 632 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 GOLGA8OA6NCC3 632 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 TMEM200CA6NKL6 621 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 A8MUI8 341 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 GOLGA8NF8WBI6 632 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 UBDO15205 165 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 PRAMEF2O60811 474 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 LRATO95237 230 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 CLPSP04118 112 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 SOX18P35713 384 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 IDH3AP50213 366 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 AQP5P55064 265 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 DCAF7P61962 342 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 KLRB1Q12918 225 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 RAPSNQ13702 412 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 EBPQ15125 230 aaKnown RBP16.4■□□□□ 0.22
CTNS-203ENST00000399306 PRSS53Q2L4Q9 553 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 ZNF385BQ569K4 471 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 NXNQ6DKJ4 435 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 Q6ZS92 163 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 DND1Q8IYX4 353 aaKnown RBP16.4■□□□□ 0.22
CTNS-203ENST00000399306 PSMA8Q8TAA3 256 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 GFM2Q969S9 779 aaKnown RBP16.4■□□□□ 0.22
CTNS-203ENST00000399306 OR52B2Q96RD2 323 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 CDCP1Q9H5V8 836 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 SLAMF7Q9NQ25 335 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 SDR39U1Q9NRG7 319 aaPredicted RBP16.4■□□□□ 0.22
CTNS-203ENST00000399306 ZIM2Q9NZV7 527 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 NTMQ9P121 344 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 ANAPC2Q9UJX6 822 aa16.4■□□□□ 0.22
CTNS-203ENST00000399306 TTC36A6NLP5 189 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 K7EM74 188 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 HRKO00198 91 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 COQ9O75208 318 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 CBX7O95931 251 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 TROVE2P10155 538 aaKnown RBP eCLIP16.39■□□□□ 0.21
CTNS-203ENST00000399306 SSTR4P31391 388 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 CASRP41180 1078 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 GUCY1A3Q02108 690 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 LRRC74AQ0VAA2 488 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 SOWAHCQ53LP3 525 aaPredicted RBP16.39■□□□□ 0.21
CTNS-203ENST00000399306 PIGGQ5H8A4 983 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 FHL5Q5TD97 284 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 B3GNTL1Q67FW5 361 aaPredicted RBP16.39■□□□□ 0.21
CTNS-203ENST00000399306 C9orf40Q8IXQ3 194 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 OR2L13Q8N349 312 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 HORMAD2Q8N7B1 307 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 ZNF321PQ8N8H1 164 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 ZNF441Q8N8Z8 693 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 OR9A2Q8NGT5 310 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 OR5P2Q8WZ92 322 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 BBC3Q96PG8 261 aaPredicted RBP16.39■□□□□ 0.21
CTNS-203ENST00000399306 DUSP26Q9BV47 211 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 WWTR1Q9GZV5 400 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 CLMPQ9H6B4 373 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 NEUROD4Q9HD90 331 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 ZNF71Q9NQZ8 489 aaPredicted RBP16.39■□□□□ 0.21
CTNS-203ENST00000399306 MRGBPQ9NV56 204 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 C19orf53Q9UNZ5 99 aaPredicted RBP16.39■□□□□ 0.21
CTNS-203ENST00000399306 KALRNO60229 2985 aa16.39■□□□□ 0.21
CTNS-203ENST00000399306 NUP214P35658 2090 aaPredicted RBP16.39■□□□□ 0.21
CTNS-203ENST00000399306 OR5H15A6NDH6 313 aa16.38■□□□□ 0.21
CTNS-203ENST00000399306 RNASET2O00584 256 aaKnown RBP16.38■□□□□ 0.21
CTNS-203ENST00000399306 PRKNO60260 465 aaPredicted RBP16.38■□□□□ 0.21
CTNS-203ENST00000399306 PSMG1O95456 288 aa16.38■□□□□ 0.21
CTNS-203ENST00000399306 LAMP1P11279 417 aa16.38■□□□□ 0.21
CTNS-203ENST00000399306 HLCSP50747 726 aa16.38■□□□□ 0.21
CTNS-203ENST00000399306 ATP4BP51164 291 aa16.38■□□□□ 0.21
CTNS-203ENST00000399306 MANFP55145 182 aaKnown RBP16.38■□□□□ 0.21
CTNS-203ENST00000399306 RPS6KA2Q15349 733 aa16.38■□□□□ 0.21
CTNS-203ENST00000399306 TLR1Q15399 786 aa16.38■□□□□ 0.21
CTNS-203ENST00000399306 LTB4RQ15722 352 aa16.38■□□□□ 0.21
CTNS-203ENST00000399306 TRMT12Q53H54 448 aaKnown RBP16.38■□□□□ 0.21
CTNS-203ENST00000399306 ANXA8L1Q5VT79 327 aa16.38■□□□□ 0.21
CTNS-203ENST00000399306 METTL21CQ5VZV1 264 aa16.38■□□□□ 0.21
CTNS-203ENST00000399306 RPUSD3Q6P087 351 aaKnown RBP16.38■□□□□ 0.21
CTNS-203ENST00000399306 FAM111BQ6SJ93 734 aa16.38■□□□□ 0.21
CTNS-203ENST00000399306 LINC00696Q6ZRV3 163 aa16.38■□□□□ 0.21
CTNS-203ENST00000399306 BEST3Q8N1M1 668 aa16.38■□□□□ 0.21
CTNS-203ENST00000399306 KRTCAP2Q8N6L1 136 aa16.38■□□□□ 0.21
CTNS-203ENST00000399306 RBMXL3Q8N7X1 1067 aaKnown RBP16.38■□□□□ 0.21
CTNS-203ENST00000399306 TEX19Q8NA77 164 aa16.38■□□□□ 0.21
CTNS-203ENST00000399306 VPS37AQ8NEZ2 397 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms